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Feature 1749 hss second try #1831

Merged
merged 34 commits into from
Jun 13, 2021
Merged

Feature 1749 hss second try #1831

merged 34 commits into from
Jun 13, 2021

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JohnHalleyGotway
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@JohnHalleyGotway JohnHalleyGotway commented Jun 13, 2021

Pull Request Testing

  • Describe testing already performed for these changes:

    I found a bug in the first PR for these changes causing a runtime error from Stat-Analysis. These changes fix that bug.
    Added new calls to Stat-Analysis in the unit tests to exercise the logic for that bug.

  • Recommend testing for the reviewer(s) to perform, including the location of input datasets, and any additional instructions:

    None.

  • Do these changes include sufficient documentation updates, ensuring that no errors or warnings exist in the build of the documentation? [Yes]

  • Do these changes include sufficient testing updates? [Yes]

  • Will this PR result in changes to the test suite? [Yes]

    If yes, describe the new output and/or changes to the existing output:

    Stat-Analysis will write 2 new output files.

  • Please complete this pull request review by [6/13/21].

Pull Request Checklist

See the METplus Workflow for details.

  • Complete the PR definition above.
  • Ensure the PR title matches the feature or bugfix branch name.
  • Define the PR metadata, as permissions allow.
    Select: Reviewer(s)
    Select: Organization level software support Project or Repository level development cycle Project
    Select: Milestone as the version that will include these changes
  • After submitting the PR, select Linked issues with the original issue number.
  • After the PR is approved, merge your changes. If permissions do not allow this, request that the reviewer do the merge.
  • Close the linked issue and delete your feature or bugfix branch from GitHub.

JohnHalleyGotway and others added 30 commits May 26, 2021 12:10
… adding new columns of output to existing line types.
…o the MCTS line type. Still need to acutally compute it and make the expected correct value configurable.
…nd Grid-Stat. Still need to actually compute it correctly, add it to other test config files, add support to series_analysis/stat_analysis, update the docs, and make writeup corresponding issues for other METplus components.
…ering with hss_ec_value preceeding rank_corr_flag.
…able class so that it's available to be included in the MCTC output line type.
…odate the move of ECvalue from the MCTSInfo class to the ContingencyTable class.
…square contingency tables is initialized to 1/size. Then, prevent that default value from being overriden with bad data.
…ince it was already initialized to a good value when the table was created.
…o MCTC/MCTS conversion both with the default EC value and overriding it using the -hss_ec_value job command.
@JohnHalleyGotway JohnHalleyGotway added this to the MET 10.1.0 milestone Jun 13, 2021
@JohnHalleyGotway JohnHalleyGotway linked an issue Jun 13, 2021 that may be closed by this pull request
20 tasks
@JohnHalleyGotway JohnHalleyGotway merged commit d79ff99 into develop Jun 13, 2021
@JohnHalleyGotway JohnHalleyGotway deleted the feature_1749_hss branch June 13, 2021 19:18
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HSS enhancement, configurable option for statistical calculation
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