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111 Open 175 Closed
111 Open 175 Closed
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Issues list

Documentation feedback enhancement New feature or request
#1082 opened Dec 10, 2024 by Nick-Eagles
2
Supporting the analysis of multi-sample SRT data
#1078 opened Dec 5, 2024 by Antidington
1
Weird error loading while creating Visium HD giotto object
#1054 opened Oct 23, 2024 by alipirani88
@iqraAmin
8
Error while updating Giotto Image
#1053 opened Oct 17, 2024 by unikill066
error in createGiottoCosMxObject() at Joining FOV gobjects
#1024 opened Sep 13, 2024 by drosop
2
Running example about HMRF bug Something isn't working
#1009 opened Aug 9, 2024 by 13954380607
1
Error in if (file == "") stdin() else file(file) : the condition has length > 1 bug Something isn't working
#1008 opened Aug 7, 2024 by 13954380607
11
coord_fix_ratio does not work as expected
#972 opened Jun 21, 2024 by kaizen89
1
About spatial proximity test
#971 opened Jun 13, 2024 by Pedramto89
An empty giottoPoints object can corrupt the giotto obj bug Something isn't working
#946 opened Apr 25, 2024 by rbutleriii
5
Error in stats::kmeans(x, centers = 2, nstart = nstart, iter.max = iter.max) bug Something isn't working
#940 opened Apr 11, 2024 by rocketeer1998
Error in overlapToMatrix bug Something isn't working
#924 opened Mar 11, 2024 by TengyuZz
@jiajic
cellProximityEnrichment() gforce error probably due to insufficient memory bug Something isn't working
#901 opened Feb 7, 2024 by hchoiHiLung
loadGiotto() in updated Giotto package can't load the data saved using the older version of Giotto bug Something isn't working
#793 opened Nov 15, 2023 by MomenehForoutan
Can giotto/SpatialDWLS report the estimated transcriptomes of the identified cell types
#787 opened Nov 1, 2023 by Dillon214
Error when running runDWLSDeconv bug Something isn't working
#786 opened Oct 30, 2023 by martina-morchio
@gcyuan
2
Nanostring CosMx and AtoMx exported data
#785 opened Oct 27, 2023 by jmodlis
@jiajic @iqraAmin
4
Failed to identify T cells in Visium data
#774 opened Oct 10, 2023 by vwtlin
2
seuratToGiotto - conversion error enhancement New feature or request
#766 opened Sep 27, 2023 by perineuronal
@iqraAmin
7
SeuratTogiotto for Single Cell Data
#761 opened Sep 19, 2023 by tsoruu
No giottoImages have been found after seuratToGiotto()
#758 opened Sep 16, 2023 by cjhong
About using FDR in heatmap bug Something isn't working
#751 opened Sep 6, 2023 by Pedramto89
3
PCA percentage of variance explained is wrong bug Something isn't working
#750 opened Sep 6, 2023 by lambdamoses
1
Error converting Giotto to Seurat object bug Something isn't working
#749 opened Sep 3, 2023 by jennie-ui
1
Enhance the interaction changed gene plot enhancement New feature or request
#738 opened Aug 22, 2023 by adamdingliang
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