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Add refresh/merge/flush totals in summary
Due to elastic#608 it's likely we need to benchmark scenarios without using the node-stats telemetry device. At the same time we want to get a general idea of how many refreshes/merges/flushes happened (in total) by accessing the index stats. Add total count for merges/refresh/flush in summary output; this is collected from `_all/primaries` in `_stats`. Also modify summary description to clarify the values are totals from primary shards. Finally fix bug where index stats where time/count == 0 got skipped from the summary. Closes elastic#614
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