Update format_disease_jensen_lab.py

update output csv file names
datacommonsorg · Nov 30, 2023 · 35c27b2 · 35c27b2
1 parent dba39a0
commit 35c27b2
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/scripts/biomedical/diseasesAtJensenLab/format_disease_jensen_lab.py b/scripts/biomedical/diseasesAtJensenLab/format_disease_jensen_lab.py
@@ -178,9 +178,9 @@ def wrapper_function(df_textmining, df_manual, df_experiment):
 	df_txt, df_txt_rna = format_genes_textmining(df_textmining)
 	df_txt1, df_txt_rna1 = format_genes_knowledge(df_manual)
 	df_txt2, df_txt_rna2 = format_genes_experiment(df_experiment)
-	df_txt[0:4003718].to_csv('codingGenes-textmining-1.csv', doublequote=False, escapechar='\\')
-	df_txt[4003719:].to_csv('codingGenes-textmining-2.csv', doublequote=False, escapechar='\\')
-	df_txt_rna.to_csv('nonCodingGenes-textmining.csv', doublequote=False, escapechar='\\')
+	df_txt[0:4003718].to_csv('codingGenes-textMining-1.csv', doublequote=False, escapechar='\\')
+	df_txt[4003719:].to_csv('codingGenes-textMining-2.csv', doublequote=False, escapechar='\\')
+	df_txt_rna.to_csv('nonCodingGenes-textMining.csv', doublequote=False, escapechar='\\')
 	df_txt1.to_csv('codingGenes-manual.csv', doublequote=False, escapechar='\\')
 	df_txt_rna1.to_csv('nonCodingGenes-manual.csv', doublequote=False, escapechar='\\')
 	df_txt2.to_csv('experiment.csv', doublequote=False, escapechar='\\')