👷 Change build and run analysis conditions

.github/workflows/build.yml

@@ -0,0 +1,45 @@
+name: Build
+
+on:
+  push:
+    branches:
+      - 'dev'
+    paths:
+      - 'Dockerfile'
+
+jobs:
+  build_and_publish_image:
+    name: Build and Publish Image
+    runs-on: ubuntu-latest-m
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          token: ${{ secrets.GH_TOKEN }}
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v2
+
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v4
+        with:
+          images: pgc-images.sbgenomics.com/d3b-bixu/open-pedcan
+          tags: |
+            type=raw,value=latest
+
+      - name: Login to DockerHub
+        uses: docker/login-action@v2
+        with:
+          registry: pgc-images.sbgenomics.com
+          username: ${{ secrets.DOCKER_HUB_USERNAME }}
+          password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }}
+
+      - name: Build and push
+        uses: docker/build-push-action@v3
+        with:
+          context: .
+          push: true
+          tags: ${{ steps.meta.outputs.tags }}
+          cache-from: type=gha
+          cache-to: type=gha,mode=max
+          build-args: github_pat=${{ secrets.GITHUB_TOKEN }}

.github/workflows/continuous_integration.yml → .github/workflows/run_analysis.yml

@@ -1,55 +1,12 @@
-name: CI
+name: Analysis
 
 on:
-  push:
-    branches:
-      - dev
   pull_request:
   workflow_dispatch:
 
 jobs:
-  build_and_publish_image:
-    name: Build and Publish Image
-    runs-on: ubuntu-latest-m
-    steps:
-      - uses: actions/checkout@v3
-        with:
-          token: ${{ secrets.GH_TOKEN }}
-
-      - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@v2
-
-      - name: Docker meta
-        id: meta
-        uses: docker/metadata-action@v4
-        with:
-          images: pgc-images.sbgenomics.com/d3b-bixu/open-pedcan
-          tags: |
-            type=raw,value=analysisjob
-            # Only tag the image with latest if we're building on the default
-            # branch (e.g., dev).
-            type=raw,value=latest,enable={{is_default_branch}}
-
-      - name: Login to DockerHub
-        uses: docker/login-action@v2
-        with:
-          registry: pgc-images.sbgenomics.com
-          username: ${{ secrets.DOCKER_HUB_USERNAME }}
-          password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }}
-
-      - name: Build and push
-        uses: docker/build-push-action@v3
-        with:
-          context: .
-          push: true
-          tags: ${{ steps.meta.outputs.tags }}
-          cache-from: type=gha
-          cache-to: type=gha,mode=max
-          build-args: github_pat=${{ secrets.GITHUB_TOKEN }}
-
   run_analysis:
     name: Run Analysis
-    needs: build_and_publish_image
     runs-on: ubuntu-latest
     strategy:
       fail-fast: false
@@ -166,19 +123,19 @@ jobs:
       - uses: actions/checkout@v3
 
       - name: Download Data
-        uses: docker://pgc-images.sbgenomics.com/d3b-bixu/open-pedcan:analysisjob
+        uses: docker://pgc-images.sbgenomics.com/d3b-bixu/open-pedcan:latest
         with:
           entrypoint: ./download-data.sh
         env:
           OPENPEDCAN_URL: https://s3.amazonaws.com/d3b-openaccess-us-east-1-prd-pbta/open-targets
           OPENPEDCAN_RELEASE: testing
 
       - name: Run Analysis
-        uses: docker://pgc-images.sbgenomics.com/d3b-bixu/open-pedcan:analysisjob
+        uses: docker://pgc-images.sbgenomics.com/d3b-bixu/open-pedcan:latest
         with:
           entrypoint: analyses/${{ matrix.entrypoint }}
         env:
           OPENPBTA_SUBSET: ${{ matrix.openpbta_subset }}
           OPENPBTA_TESTING: ${{ matrix.openpbta_testing }}
           RUN_FOR_SUBTYPING: ${{ matrix.run_for_subtyping }}
-          OPENPEDCAN_POLYA_STRAND: ${{ matrix.openpedcan_polya_strand }}
+          OPENPEDCAN_POLYA_STRAND: ${{ matrix.openpedcan_polya_strand }}