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23 Open 68 Closed
23 Open 68 Closed
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Issues list

chr prefix
#129 opened Mar 6, 2024 by hidehitofukushima
alleleCounter: cannot execute binary file
#128 opened Oct 10, 2022 by tomvdbosch
5
Argument "X" isn't numeric in sprintf at /opt/bundle/lib/perl5/Sanger/CGP/Battenberg/Implement.pm line 345.
#127 opened Jun 25, 2022 by acirrincio
pagefaults 0swaps
#126 opened Dec 8, 2021 by GodloveD
4
Make links to quay.io images more explicit
#125 opened Dec 7, 2021 by keiranmraine
Option 'process' is not an expected process type: output . at /opt/wtsi-cgp/lib/perl5/PCAP/Cli.pm line 90.
#123 opened Dec 3, 2021 by jamesdalg
5
Interpretation of subclone.txt stateA and B
#122 opened Oct 30, 2020 by yasunorikogure
Issue in gc.correct.wgs
#121 opened Oct 15, 2020 by quentinba
2
Reference files for GRCh38
#113 opened Apr 6, 2020 by larsmew
3
reference genome is not downloaded using 'download_generate_bberg_ref_files.pl' bug
#110 opened Nov 28, 2019 by skdhanda
5
change base of builder image
#106 opened Nov 18, 2019 by keiranmraine
prob_loci ref files
#103 opened Oct 16, 2019 by Sames-Jtudd
2
Any support/plans for CRAM file support? enhancement
#102 opened Oct 11, 2019 by Sames-Jtudd
2
Default values not being set
#101 opened Sep 25, 2019 by rulixxx
Hardcoded reference filenames
#98 opened Aug 19, 2019 by ghost
Working with GRCh38 and 10x data
#92 opened Nov 28, 2018 by aganezov
setupR.sh - update R version
#91 opened Nov 14, 2018 by keiranmraine
missing List/MoreUtils.pm in installation procedure
#87 opened Aug 14, 2018 by jsmedmar
Instruction about the result
#85 opened Jul 18, 2018 by xtmgah
5
Fix license text
#83 opened Jul 10, 2018 by keiranmraine
CRAN mirror down causes Rsupport/setupR.sh to fail
#81 opened Apr 18, 2018 by ghost
Error msg regarding 1k-genome-loci-file
#40 opened Dec 9, 2016 by sunyounglee
10
BAFsegmented file not always sorted in chromosomal order bug
#22 opened Nov 25, 2015 by sdentro
@sdentro
2
ProTip! Follow long discussions with comments:>50.