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add task: download_from_url() to download a URL to a file viral-pipelines CI #2682: Pull request #562 synchronize by tomkinsc
November 5, 2024 17:45 36m 28s ct-add-task-get-from-web
ct-add-task-get-from-web
November 5, 2024 17:45 36m 28s
PR #563 CodeQL #132: by tomkinsc
November 5, 2024 17:45 58s refs/pull/563/head
refs/pull/563/head
November 5, 2024 17:45 58s
s/Array[File]+/Array[File?]+/g for tsv_files input in terra_tsv_to_table.wdl viral-pipelines CI #2681: Pull request #563 synchronize by tomkinsc
November 5, 2024 17:45 26m 16s ct-terra-troubleshoot-undefined-input-files
ct-terra-troubleshoot-undefined-input-files
November 5, 2024 17:45 26m 16s
Merge branch 'master' into ct-add-task-get-from-web viral-pipelines CI #2680: Commit f676453 pushed by tomkinsc
November 5, 2024 17:45 5m 22s ct-add-task-get-from-web
ct-add-task-get-from-web
November 5, 2024 17:45 5m 22s
PR #564 CodeQL #131: by tomkinsc
November 5, 2024 17:45 1m 29s refs/pull/564/head
refs/pull/564/head
November 5, 2024 17:45 1m 29s
Merge branch 'master' into ct-terra-troubleshoot-undefined-input-files viral-pipelines CI #2679: Commit 11828de pushed by tomkinsc
November 5, 2024 17:45 5m 9s ct-terra-troubleshoot-undefined-input-files
ct-terra-troubleshoot-undefined-input-files
November 5, 2024 17:45 5m 9s
add deduplication of sequences by ID in augur_from_assemblies viral-pipelines CI #2678: Pull request #564 synchronize by tomkinsc
November 5, 2024 17:45 27m 28s ct-dedup-sequences-in-augur_from_assemblies
ct-dedup-sequences-in-augur_from_assemblies
November 5, 2024 17:45 27m 28s
Merge branch 'master' into ct-dedup-sequences-in-augur_from_assemblies viral-pipelines CI #2677: Commit eaeee77 pushed by tomkinsc
November 5, 2024 17:45 28m 45s ct-dedup-sequences-in-augur_from_assemblies
ct-dedup-sequences-in-augur_from_assemblies
November 5, 2024 17:45 28m 45s
PR #553 CodeQL #130: by tomkinsc
November 5, 2024 17:45 1m 28s refs/pull/553/head
refs/pull/553/head
November 5, 2024 17:45 1m 28s
attempt at fixing OpenBLAS-related nproc limit viral-pipelines CI #2676: Pull request #553 synchronize by tomkinsc
November 5, 2024 17:45 1m 24s ct-bugfix-depletion-nproc-limit
ct-bugfix-depletion-nproc-limit
November 5, 2024 17:45 1m 24s
Merge branch 'master' into ct-bugfix-depletion-nproc-limit viral-pipelines CI #2675: Commit b62f62e pushed by tomkinsc
November 5, 2024 17:44 1m 56s ct-bugfix-depletion-nproc-limit
ct-bugfix-depletion-nproc-limit
November 5, 2024 17:44 1m 56s
update viral-core 2.3.6 -> 2.4.0 (#566) viral-pipelines CI #2674: Commit d655726 pushed by tomkinsc
November 5, 2024 17:38 30m 30s master
master
November 5, 2024 17:38 30m 30s
Push on master CodeQL #129: by tomkinsc
November 5, 2024 17:38 1m 19s master
master
November 5, 2024 17:38 1m 19s
PR #549 CodeQL #128: by tomkinsc
November 5, 2024 17:36 1m 19s refs/pull/549/head
refs/pull/549/head
November 5, 2024 17:36 1m 19s
limit GH build concurrency viral-pipelines CI #2673: Pull request #549 synchronize by tomkinsc
November 5, 2024 17:36 9m 32s ct-bugfix-dx-deploy-failures
ct-bugfix-dx-deploy-failures
November 5, 2024 17:36 9m 32s
Merge branch 'master' into ct-bugfix-dx-deploy-failures viral-pipelines CI #2672: Commit 31637d8 pushed by tomkinsc
November 5, 2024 17:36 9m 28s ct-bugfix-dx-deploy-failures
ct-bugfix-dx-deploy-failures
November 5, 2024 17:36 9m 28s
PR #561 CodeQL #127: by tomkinsc
November 5, 2024 17:36 1m 3s refs/pull/561/head
refs/pull/561/head
November 5, 2024 17:36 1m 3s
demux_deplete: allow multiple biosample attribute files viral-pipelines CI #2671: Pull request #561 synchronize by tomkinsc
November 5, 2024 17:36 26m 8s ct-demux_deplete-allow_multiple_biosample_attribute_files
ct-demux_deplete-allow_multiple_biosample_attribute_files
November 5, 2024 17:36 26m 8s
Merge branch 'master' into ct-demux_deplete-allow_multiple_biosample_… viral-pipelines CI #2670: Commit 3f5d676 pushed by tomkinsc
November 5, 2024 17:36 26m 14s ct-demux_deplete-allow_multiple_biosample_attribute_files
ct-demux_deplete-allow_multiple_biosample_attribute_files
November 5, 2024 17:36 26m 14s
PR #562 CodeQL #126: by tomkinsc
November 5, 2024 17:36 1m 18s refs/pull/562/head
refs/pull/562/head
November 5, 2024 17:36 1m 18s
add task: download_from_url() to download a URL to a file viral-pipelines CI #2669: Pull request #562 synchronize by tomkinsc
November 5, 2024 17:36 24m 59s ct-add-task-get-from-web
ct-add-task-get-from-web
November 5, 2024 17:36 24m 59s
Merge branch 'master' into ct-add-task-get-from-web viral-pipelines CI #2668: Commit da1d311 pushed by tomkinsc
November 5, 2024 17:36 25m 4s ct-add-task-get-from-web
ct-add-task-get-from-web
November 5, 2024 17:36 25m 4s
PR #563 CodeQL #125: by tomkinsc
November 5, 2024 17:36 1m 21s refs/pull/563/head
refs/pull/563/head
November 5, 2024 17:36 1m 21s
s/Array[File]+/Array[File?]+/g for tsv_files input in terra_tsv_to_table.wdl viral-pipelines CI #2667: Pull request #563 synchronize by tomkinsc
November 5, 2024 17:36 25m 56s ct-terra-troubleshoot-undefined-input-files
ct-terra-troubleshoot-undefined-input-files
November 5, 2024 17:36 25m 56s
Merge branch 'master' into ct-terra-troubleshoot-undefined-input-files viral-pipelines CI #2666: Commit 85626ff pushed by tomkinsc
November 5, 2024 17:35 24m 59s ct-terra-troubleshoot-undefined-input-files
ct-terra-troubleshoot-undefined-input-files
November 5, 2024 17:35 24m 59s