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Update rmats for osx-arm64 #52195

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Nov 21, 2024
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104 changes: 0 additions & 104 deletions recipes/rmats/build_failure.osx-64.yaml

This file was deleted.

13 changes: 9 additions & 4 deletions recipes/rmats/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -8,9 +8,12 @@ package:
source:
sha256: c78e6411b7c6634cc31511b69d37a6a3da2e2e076e87609679818debd513aa7a
url: https://github.com/Xinglab/rmats-turbo/releases/download/v{{ version }}/rmats_turbo_v{{ version|replace(".","_") }}.tar.gz
patches:
# remove patch when a release includes: https://github.com/Xinglab/rmats-turbo/pull/453
- rmats_pipeline_setup.patch

build:
number: 3
number: 4
run_exports:
- {{ pin_subpackage(name, max_pin="x") }}

Expand All @@ -26,16 +29,17 @@ requirements:
- python
- cython
- numpy
- gsl 2.5
- gsl
- zlib
- libblas
- liblapack
- setuptools
run:
- python
- numpy
- gsl 2.5
- gsl
- zlib
- star >=2.5
- star >=2.5 # [not (osx and arm64)]

test:
commands:
Expand All @@ -51,3 +55,4 @@ about:
extra:
additional-platforms:
- linux-aarch64
- osx-arm64
11 changes: 11 additions & 0 deletions recipes/rmats/rmats_pipeline_setup.patch
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
--- rMATS_pipeline/setup.py 2024-11-19 14:12:11.355314000 -0500
+++ rMATS_pipeline/setup.py 2024-11-19 14:12:11.355314000 -0500
@@ -1,6 +1,6 @@
import os
-from distutils.core import setup
-from distutils.extension import Extension
+from setuptools import setup
+from setuptools import Extension
from Cython import __version__ as cython_version
from Cython.Build import cythonize
from Cython.Distutils import build_ext