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Update TRTools to 6.1.0 #51982

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merged 3 commits into from
Nov 7, 2024
Merged

Update TRTools to 6.1.0 #51982

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13c8b32
Update TRTools to 6.1.0
aryarm Nov 6, 2024
094474b
enable osx-arm64 builds for trtools
aryarm Nov 6, 2024
a01f63a
might as well add linux-aarch64 while we're at it
aryarm Nov 6, 2024
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13 changes: 10 additions & 3 deletions recipes/trtools/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
{% set name = "trtools" %}
{% set version = "6.0.2" %}
{% set version = "6.1.0" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz
sha256: 7bdb476951a4ec748df20058a31da3d1def14554cd9a67f85d3c61bf63f8f303
sha256: 3a177cf19060945eff4044f16d5ebdc66364e72a8a3c9bd725086ba10003df96

build:
noarch: python
Expand All @@ -20,6 +20,7 @@ build:
- associaTR=trtools.associaTR:run
- prancSTR = trtools.prancSTR:run
- simTR = trtools.simTR:run
- annotaTR = trtools.annotaTR:run
script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv"
number: 0
run_exports:
Expand All @@ -32,7 +33,7 @@ requirements:
- pip >=20.3
run:
- python >=3.7.1,<4.0
- cyvcf2 >=0.30.4
- cyvcf2 >=0.30.27
- matplotlib-base >=3.1.2
- numpy >=1.17.3
- pandas >=1.2.0
Expand All @@ -42,6 +43,7 @@ requirements:
- statsmodels >=0.10.2
- pyfaidx >=0.5.6
- ART >=2016.06.05
- pgenlib >=0.90.1

test:
imports:
Expand All @@ -54,6 +56,7 @@ test:
- trtools.statSTR
- trtools.prancSTR
- trtools.simTR
- trtools.annotaTR
- trtools.utils
requires:
- bcftools
Expand All @@ -69,6 +72,7 @@ test:
- qcSTR --help
- prancSTR --help
- simTR --help
- annotaTR --help

about:
home: https://github.com/gymreklab/TRTools
Expand All @@ -86,3 +90,6 @@ extra:
identifiers:
- biotools:trtools
- doi:10.1093/bioinformatics/btaa736
additional-platforms:
- osx-arm64
- linux-aarch64
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