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Update snakemake to 8.22.0 #51362

Merged
merged 1 commit into from
Oct 14, 2024
Merged

Update snakemake to 8.22.0 #51362

merged 1 commit into from
Oct 14, 2024

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Update snakemake: 8.21.08.22.0

install with bioconda Conda

Info Link or Description
Recipe recipes/snakemake (click to view/edit other files)
Summary A popular workflow management system aiming at full in-silico reproducibility.
Home https://snakemake.github.io
Releases https://pypi.org/pypi/snakemake/json
Recipe Maintainer(s) @johanneskoester, @corneliusroemer

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 13, 2024
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coderabbitai bot commented Oct 13, 2024

📝 Walkthrough

Walkthrough

The pull request involves an update to the meta.yaml file for the Snakemake package. The version number has been incremented from 8.21.0 to 8.22.0, and the SHA256 checksum for the source tarball has been updated accordingly from dcb30052645ab89facf680ef4ec021143eb5ef862bb2d2de2ec190a616c3c471 to fe94ee1432ec07af783220bd115ea94b2262072956366a81b6762a9969c11f4a. Additionally, the requirements section has been modified to ensure compatibility with the new version of snakemake-minimal. The test commands in the file remain unchanged, continuing to verify the version of Snakemake and ensuring that the installation is correct. Overall, the structure of the meta.yaml file has not been altered beyond these specific updates related to versioning and checksum.

Possibly related PRs

  • Update snakemake to 8.20.6 #51219: This PR updates the snakemake package version from 8.20.6 to 8.20.7, which is directly related to the versioning changes in the main PR that updates snakemake from 8.21.0 to 8.22.0.
  • Update snakemake to 8.20.7 #51327: This PR updates the snakemake package version from 8.20.6 to 8.20.7, which is relevant as it shows the progression of version updates leading to the changes in the main PR.
  • Update snakemake to 8.21.0 #51351: This PR updates the snakemake package version from 8.20.7 to 8.21.0, which is directly related to the versioning changes in the main PR that updates snakemake to 8.22.0.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between acd125a and 3cbfc40.

📒 Files selected for processing (1)
  • recipes/snakemake/meta.yaml (1 hunks)
🧰 Additional context used
🔇 Additional comments (3)
recipes/snakemake/meta.yaml (3)

4-4: Version update looks good.

The version has been correctly updated to 8.22.0, which aligns with the PR objective.


Line range hint 1-165: File consistency looks good.

The meta.yaml file has been updated consistently:

  1. The version number has been updated throughout the file.
  2. The snakemake-minimal dependency in the requirements section correctly uses the new version.
  3. Test commands still verify the correct version number.

No other changes were necessary for this version update, and the file structure remains intact.

🧰 Tools
🪛 yamllint

[error] 3-3: syntax error: found character '%' that cannot start any token

(syntax)


12-12: SHA256 checksum update looks correct.

The SHA256 checksum has been updated, which is necessary for the new version. However, it's important to verify the authenticity of this checksum.

To verify the checksum, you can run the following script:


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@martin-g martin-g merged commit c1ac79d into master Oct 14, 2024
7 checks passed
@martin-g martin-g deleted the bump/snakemake branch October 14, 2024 09:17
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