Update vamos to 2.1.5

[BiocondaBot]

Update vamos: 2.1.4 → 2.1.5

Info	Link or Description
Recipe	recipes/vamos (click to view/edit other files)
Summary	VNTR annotation using efficient motif selection
Home	https://github.com/ChaissonLab/vamos
Releases	https://github.com/ChaissonLab/vamos/tags
Author	@ChaissonLab

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This pull request was automatically generated (see docs).

[coderabbitai]

📝 Walkthrough

Walkthrough

The pull request involves an update to the meta.yaml file for the vamos package. The primary changes include an increment of the package version from "2.1.4" to "2.1.5". Alongside this version update, the source URL has been modified to link to the new tarball for version 2.1.5, specifically vamos-v2.1.5.tar.gz. Additionally, the SHA256 checksum for the new source archive has been updated from a4eb6d535e03cfa97192c821f5c896796a8953b039dd24ea6645fe537cba8740 to 2b0c5fde8be2599eba8b1dbd563db543077033b02a6d118a4efd26b0612c4433. There are no other modifications to the structure or content of the meta.yaml file.

Possibly related PRs

• Update savana to 1.2.2 #51103: The savana package's meta.yaml file was updated similarly to the vamos package, with a version increment and SHA256 checksum update.
• Update qtlseq to 2.2.5 #51172: The qtlseq package's meta.yaml file also underwent a version update and SHA256 checksum modification, paralleling the changes made in the vamos package.
• Update vclean to 0.1.9 #51174: The vclean package's meta.yaml file was updated with a version increment and SHA256 checksum change, reflecting a similar pattern to the vamos package.
• Update vclean to 0.2.0 #51193: Another update to the vclean package's meta.yaml file, with a version bump and SHA256 checksum adjustment, aligns with the changes in the vamos package.
• Update vitap to 1.7 #51215: The vitap package's meta.yaml file was updated with a version change and SHA256 checksum update, akin to the modifications in the vamos package.
• Update meta.yaml, VITAP v.1.7 #51220: This PR also involves updating the vitap package's meta.yaml file with a version increment and SHA256 checksum change, similar to the vamos package.
• Update vclean to 0.2.1 #51223: The vclean package's meta.yaml file was updated with a version increment and SHA256 checksum change, mirroring the changes in the vamos package.
• Update viroconstrictor to 1.4.6 #51247: The viroconstrictor package's meta.yaml file was updated with a version increment and SHA256 checksum change, reflecting the same type of modifications as in the vamos package.

Suggested reviewers

• martin-g

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📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 8c12e52 and 28ce19f.

📒 Files selected for processing (1)

• recipes/vamos/meta.yaml (2 hunks)

🧰 Additional context used

🪛 yamllint

recipes/vamos/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (4)

recipes/vamos/meta.yaml (4)

1-1: LGTM: Version update is correct.

The version has been correctly updated to "2.1.5", which aligns with the PR objectives.

🧰 Tools

🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

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Line range hint 1-52: LGTM: Version update completed successfully.

The changes in this PR are minimal and focused, correctly updating the vamos package from version 2.1.4 to 2.1.5. The following updates have been made:

1. Version number updated to 2.1.5
2. Source URL updated to point to the new version's tarball
3. SHA256 checksum updated for the new tarball

All other aspects of the meta.yaml file, including dependencies and build configurations, remain unchanged, which is appropriate for this type of version bump.

---

9-9: LGTM: Source URL updated correctly.

The source URL has been properly updated to point to the new version 2.1.5 tarball.

To ensure the URL is valid and the tarball exists, you can run the following command:

#!/bin/bash
# Verify that the source URL is accessible
curl -I https://github.com/ChaissonLab/vamos/archive/refs/tags/vamos-v2.1.5.tar.gz | head -n 1

This command should return an HTTP 200 OK status if the URL is valid and the file exists.

---

10-10: LGTM: SHA256 checksum updated.

The SHA256 checksum has been updated, which is necessary for the new version.

To ensure the integrity of the package, please verify that the provided SHA256 checksum matches the actual checksum of the downloaded tarball. You can use the following command:

Compare the output of this command with the checksum in the meta.yaml file to ensure they match.

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