Update piawka #51239
Update piawka #51239
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📝 WalkthroughWalkthroughThe pull request introduces changes to two files within the Suggested labels
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Actionable comments posted: 2
🧹 Outside diff range and nitpick comments (3)
recipes/piawka/build.sh (1)
Line range hint
1-7: Overall simplification with potential for refinementThe build script has been significantly simplified, which can make it easier to maintain. However, this simplification comes with potential risks:
- Lack of error checking and logging.
- Potential inclusion of unnecessary files.
- Broad application of executable permissions.
Consider implementing the following improvements:
- Add error checking and logging throughout the script.
- Implement more targeted file copying and permission setting.
- Reintroduce shebang modifications if necessary for cross-platform compatibility.
- Add comments explaining the purpose of each step in the build process.
These changes would make the script more robust, secure, and maintainable while retaining its simplicity.
recipes/piawka/meta.yaml (2)
20-20: Dependency update looks good, with a minor suggestion.The switch from
mawktogawkaligns with the PR objectives. Using a minimum version forgawkis a good practice. However, to ensure consistency across different systems, consider pinning the major version:- conda-forge::gawk >=5.0.0,<6This will prevent potential issues if a major version update introduces breaking changes.
26-26: Test command update looks good, with a minor formatting issue.The test command has been updated to reflect changes in the package's interface, which is good. However, there's a trailing space at the end of the line that should be removed.
- - piawka --help + - piawka --helpThis will resolve the yamllint warning about trailing spaces.
🧰 Tools
🪛 yamllint
[error] 26-26: trailing spaces
(trailing-spaces)
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📒 Files selected for processing (2)
- recipes/piawka/build.sh (1 hunks)
- recipes/piawka/meta.yaml (2 hunks)
🧰 Additional context used
🪛 yamllint
recipes/piawka/meta.yaml
[error] 23-23: trailing spaces
(trailing-spaces)
[error] 26-26: trailing spaces
(trailing-spaces)
🔇 Additional comments (4)
recipes/piawka/build.sh (1)
1-2: LGTM: Shebang and directory creation are correct.The shebang and directory creation are standard and appropriate for this type of build script.
recipes/piawka/meta.yaml (3)
2-2: Version update looks good.The package version has been correctly updated to 0.8.1, which aligns with the PR objectives.
Line range hint
1-48: Overall, the changes look good and align with the PR objectives.The updates to the
piawkarecipe, including version bump, dependency changes, and test command modifications, have been implemented correctly. A few minor suggestions have been made to improve dependency pinning and formatting. Once these small adjustments are addressed, the recipe should be ready for merging.🧰 Tools
🪛 yamllint
[error] 1-1: syntax error: found character '%' that cannot start any token
(syntax)
10-10: SHA256 checksum update looks good.The SHA256 checksum has been updated to match the new version's source. This is consistent with the version change.
Let's verify that the source URL has been updated correctly:
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@BiocondaBot please add label |
Updating
piawkamanually with some changes in the recipe and build.sh because I switched to other dependencies, thus probably more than bioconda-utils can handle. (I also could not find theconfig.yamlfile for which I was asked bybioconda-utils autobump...)Please read the guidelines for Bioconda recipes before opening a pull request (PR).
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If not already present in the meta.yaml, make sure to specify
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run_exportssection like this:with
...being one of:{{ pin_subpackage("myrecipe", max_pin="x") }}{{ pin_subpackage("myrecipe", max_pin="x.x") }}{{ pin_subpackage("myrecipe", max_pin="x.x") }}(in such a case, please add a note that shortly mentions your evidence for that){{ pin_subpackage("myrecipe", max_pin="x.x.x") }}(in such a case, please add a note that shortly mentions your evidence for that){{ pin_subpackage("myrecipe", max_pin=None) }}while replacing
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