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Update sizemeup to 1.1.1 #51061

Merged
merged 1 commit into from
Oct 1, 2024
Merged

Update sizemeup to 1.1.1 #51061

merged 1 commit into from
Oct 1, 2024

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@BiocondaBot BiocondaBot commented Oct 1, 2024

Update sizemeup: 1.1.01.1.1

install with bioconda Conda

Info Link or Description
Recipe recipes/sizemeup (click to view/edit other files)
Summary A simple tool to determine the genome size of an organism
Home https://github.com/rpetit3/sizemeup
Releases https://github.com/rpetit3/sizemeup/tags
Recipe Maintainer(s) @rpetit3
Author @rpetit3

This pull request was automatically generated (see docs).

Summary by CodeRabbit

  • New Features

    • Updated the sizemeup package to version 1.1.1, including a new source URL for the latest version.
  • Bug Fixes

    • Revised SHA256 checksum to ensure integrity of the updated package.

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 1, 2024
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coderabbitai bot commented Oct 1, 2024

📝 Walkthrough

Walkthrough

The pull request updates the meta.yaml file for the sizemeup package, changing its version from 1.1.0 to 1.1.1. The source URL has been updated to link to the new version's tarball, and the SHA256 checksum for the source archive has been modified to reflect the new content. Other metadata, requirements, test commands, and maintainer information remain unchanged.

Changes

Files Change Summary
recipes/sizemeup/meta.yaml - Version updated from 1.1.0 to 1.1.1
- Source URL updated to new version tarball
- SHA256 checksum updated to a new value

Possibly related PRs

  • Update sizemeup to 1.1.0 #51055: This PR updates the sizemeup package from version 1.0.2 to 1.1.0, which is directly related to the main PR that updates the version from 1.1.0 to 1.1.1.

Suggested reviewers

  • rpetit3

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 05feeb6 and 82c27a6.

📒 Files selected for processing (1)
  • recipes/sizemeup/meta.yaml (1 hunks)
🔇 Additional comments (3)
recipes/sizemeup/meta.yaml (3)

10-10: SHA256 checksum update looks good.

The SHA256 checksum has been updated, which is expected due to the new version of the package.

To ensure the integrity of the package, please verify that the new SHA256 checksum is correct for the updated package version. You can use the following command to download the package and verify its checksum:

#!/bin/bash
# Description: Download the package and verify its SHA256 checksum

# Extract the URL and expected SHA256 from the meta.yaml file
URL=$(grep "url:" recipes/sizemeup/meta.yaml | awk '{print $2}')
EXPECTED_SHA256=$(grep "sha256:" recipes/sizemeup/meta.yaml | awk '{print $2}')

# Download the package
curl -L -o package.tar.gz $URL

# Calculate the SHA256 of the downloaded package
CALCULATED_SHA256=$(sha256sum package.tar.gz | awk '{print $1}')

# Compare the calculated SHA256 with the expected SHA256
if [ "$CALCULATED_SHA256" = "$EXPECTED_SHA256" ]; then
    echo "SHA256 checksum verification passed."
else
    echo "SHA256 checksum verification failed."
    echo "Expected: $EXPECTED_SHA256"
    echo "Calculated: $CALCULATED_SHA256"
fi

# Clean up
rm package.tar.gz

Line range hint 1-52: Overall file consistency looks good, but please verify.

The version update and SHA256 checksum change have been correctly applied. The build number is appropriately set to 0 for the new version. However, please verify the following:

  1. Ensure that the requirements (both host and run) are still valid for version 1.1.1.
  2. Confirm that all test commands are still applicable and sufficient for the new version.
  3. Verify that the package summary and license information remain accurate.

To assist with this verification, you can run the following commands:

Please review the output of these commands to ensure all information is up-to-date and accurate for version 1.1.1.

✅ Verification successful

Verification Successful: The recipes/sizemeup/meta.yaml file is consistent with the updated version.

  • All package requirements and test commands are valid for version 1.1.1.
  • Package summary and license information are accurate.
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify package requirements and test commands

# Check if there are any version-specific requirements
grep -n "version" recipes/sizemeup/meta.yaml

# List all requirements
echo "Host requirements:"
sed -n '/host:/,/run:/p' recipes/sizemeup/meta.yaml | grep -v "run:"
echo "Run requirements:"
sed -n '/run:/,/test:/p' recipes/sizemeup/meta.yaml | grep -v "test:"

# List all test commands
echo "Test commands:"
sed -n '/commands:/,/requires:/p' recipes/sizemeup/meta.yaml | grep -v "requires:"

# Check package summary and license
echo "Package summary and license:"
sed -n '/about:/,/extra:/p' recipes/sizemeup/meta.yaml | grep -v "extra:"

Length of output: 1140

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


2-2: Version update looks good.

The version has been correctly updated from 1.1.0 to 1.1.1, which is consistent with the PR objectives.

Let's verify if this version update is consistently reflected throughout the file:


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@rpetit3 rpetit3 merged commit 8cc9af6 into master Oct 1, 2024
7 checks passed
@rpetit3 rpetit3 deleted the bump/sizemeup branch October 1, 2024 04:28
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