Update Picard to 2.18.27. #13795
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Update Picard to 2.18.27. #13795
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fgiacomoni
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Feb 28, 2019
# By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (#13805) we lost the dexseq_count script (#13806) Amptk (#13809) rebuild amptk (#13802) Sparc: add utilities (#13804) update wgbs snakepipes tools (#13793) Rebuild exonerate (#13686) Update Picard to 2.18.27. (#13795) Update to official release, add patch (#13791) Add PylProtPredictor (#13790) Update cgpbigwig to 1.0.3 (#13258) Update treetime to 0.5.3 (#13249) added shapeshifter-cli recipe (#13667) Update post-link.sh (#13767) v0.1.6 February 2019 Release (#13789) Add notes regarding binary name (#13762) update maaslin to version 0.0.5 (#13788) Gromacs 2018.6 patch (#13787) Use khronos opencl on osx (#13786) ...
BiocondaBot
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Jan 16, 2020
Merge PR #19779, commits were: * remove noarch * Add noarch * add c compiler * includes annoying things (based on #12755) to try solving compilation issue... * fix sha256 value * Add perl-text-csv_xs recipe * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19772 [ci skip] Merge PR 19773 MSGF+ version bump (#19769) * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19747 [ci skip] Merge PR 19768 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (2210 commits) [ci skip] Merge PR 19683 Update refgenconf to 0.6.2 (#19754) [ci skip] Merge PR 19762 [ci skip] Merge PR 19763 [ci skip] Merge PR 19760 [ci skip] Merge PR 19758 [ci skip] Merge PR 19744 [ci skip] Merge PR 19719 [ci skip] Merge PR 19751 [ci skip] Merge PR 19748 [ci skip] Merge PR 19757 [ci skip] Merge PR 19756 [ci skip] Merge PR 19753 [ci skip] Merge PR 19750 [ci skip] Merge PR 19743 [ci skip] Merge PR 19745 Update r-brio to 0.3.17 (#19662) Update kma to 1.2.21 (#19742) [ci skip] Merge PR 19739 [ci skip] Merge PR 19741 ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (#17007) Remove 5 packages from the blacklist (#17004) Update validators to 0.14.0 (#17002) Update epic2 to 0.0.39 (#17003) Update r-seurat to 3.1.0 (#17001) Update bbknn to 1.3.5 (#15908) Update sra-tools to 2.10.0 (#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (#16999) Update ncbi-vdb to 2.10.0 (#16997) add r-immunedeconv (#16103) Update rgt to 0.12.2 (#16981) python-chado 2.3.0 (#16995) build spades from source (#16937) Update n50 to 0.83 (#16994) Update picard-slim to 2.20.6 (#16993) Update picard to 2.20.6 (#16992) bcftools polysomy (#16989) Update fastq-scan to 0.4.0 (#16991) Add Logomaker (#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (#13805) we lost the dexseq_count script (#13806) Amptk (#13809) rebuild amptk (#13802) Sparc: add utilities (#13804) update wgbs snakepipes tools (#13793) Rebuild exonerate (#13686) Update Picard to 2.18.27. (#13795) Update to official release, add patch (#13791) Add PylProtPredictor (#13790) Update cgpbigwig to 1.0.3 (#13258) Update treetime to 0.5.3 (#13249) added shapeshifter-cli recipe (#13667) Update post-link.sh (#13767) v0.1.6 February 2019 Release (#13789) Add notes regarding binary name (#13762) update maaslin to version 0.0.5 (#13788) Gromacs 2018.6 patch (#13787) Use khronos opencl on osx (#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
BiocondaBot
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Jan 21, 2020
Merge PR #19771, commits were: * readd test * Remove tests and update version num * add csv_xs package * add perl-text-csv * Add perl-file-sharedir-install * Add noarch * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes into perl-metabolomics-fragment-annotation-0.2.0 * Init perl-metabolomics-fragment-annotation with its version 0.2. * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (#17007) Remove 5 packages from the blacklist (#17004) Update validators to 0.14.0 (#17002) Update epic2 to 0.0.39 (#17003) Update r-seurat to 3.1.0 (#17001) Update bbknn to 1.3.5 (#15908) Update sra-tools to 2.10.0 (#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (#16999) Update ncbi-vdb to 2.10.0 (#16997) add r-immunedeconv (#16103) Update rgt to 0.12.2 (#16981) python-chado 2.3.0 (#16995) build spades from source (#16937) Update n50 to 0.83 (#16994) Update picard-slim to 2.20.6 (#16993) Update picard to 2.20.6 (#16992) bcftools polysomy (#16989) Update fastq-scan to 0.4.0 (#16991) Add Logomaker (#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (#13805) we lost the dexseq_count script (#13806) Amptk (#13809) rebuild amptk (#13802) Sparc: add utilities (#13804) update wgbs snakepipes tools (#13793) Rebuild exonerate (#13686) Update Picard to 2.18.27. (#13795) Update to official release, add patch (#13791) Add PylProtPredictor (#13790) Update cgpbigwig to 1.0.3 (#13258) Update treetime to 0.5.3 (#13249) added shapeshifter-cli recipe (#13667) Update post-link.sh (#13767) v0.1.6 February 2019 Release (#13789) Add notes regarding binary name (#13762) update maaslin to version 0.0.5 (#13788) Gromacs 2018.6 patch (#13787) Use khronos opencl on osx (#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
jvanheld
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Jan 21, 2020
Merge PR bioconda#19779, commits were: * remove noarch * Add noarch * add c compiler * includes annoying things (based on bioconda#12755) to try solving compilation issue... * fix sha256 value * Add perl-text-csv_xs recipe * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19772 [ci skip] Merge PR 19773 MSGF+ version bump (bioconda#19769) * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19747 [ci skip] Merge PR 19768 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (2210 commits) [ci skip] Merge PR 19683 Update refgenconf to 0.6.2 (bioconda#19754) [ci skip] Merge PR 19762 [ci skip] Merge PR 19763 [ci skip] Merge PR 19760 [ci skip] Merge PR 19758 [ci skip] Merge PR 19744 [ci skip] Merge PR 19719 [ci skip] Merge PR 19751 [ci skip] Merge PR 19748 [ci skip] Merge PR 19757 [ci skip] Merge PR 19756 [ci skip] Merge PR 19753 [ci skip] Merge PR 19750 [ci skip] Merge PR 19743 [ci skip] Merge PR 19745 Update r-brio to 0.3.17 (bioconda#19662) Update kma to 1.2.21 (bioconda#19742) [ci skip] Merge PR 19739 [ci skip] Merge PR 19741 ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (bioconda#17007) Remove 5 packages from the blacklist (bioconda#17004) Update validators to 0.14.0 (bioconda#17002) Update epic2 to 0.0.39 (bioconda#17003) Update r-seurat to 3.1.0 (bioconda#17001) Update bbknn to 1.3.5 (bioconda#15908) Update sra-tools to 2.10.0 (bioconda#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (bioconda#16999) Update ncbi-vdb to 2.10.0 (bioconda#16997) add r-immunedeconv (bioconda#16103) Update rgt to 0.12.2 (bioconda#16981) python-chado 2.3.0 (bioconda#16995) build spades from source (bioconda#16937) Update n50 to 0.83 (bioconda#16994) Update picard-slim to 2.20.6 (bioconda#16993) Update picard to 2.20.6 (bioconda#16992) bcftools polysomy (bioconda#16989) Update fastq-scan to 0.4.0 (bioconda#16991) Add Logomaker (bioconda#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (bioconda#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (bioconda#13805) we lost the dexseq_count script (bioconda#13806) Amptk (bioconda#13809) rebuild amptk (bioconda#13802) Sparc: add utilities (bioconda#13804) update wgbs snakepipes tools (bioconda#13793) Rebuild exonerate (bioconda#13686) Update Picard to 2.18.27. (bioconda#13795) Update to official release, add patch (bioconda#13791) Add PylProtPredictor (bioconda#13790) Update cgpbigwig to 1.0.3 (bioconda#13258) Update treetime to 0.5.3 (bioconda#13249) added shapeshifter-cli recipe (bioconda#13667) Update post-link.sh (bioconda#13767) v0.1.6 February 2019 Release (bioconda#13789) Add notes regarding binary name (bioconda#13762) update maaslin to version 0.0.5 (bioconda#13788) Gromacs 2018.6 patch (bioconda#13787) Use khronos opencl on osx (bioconda#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
jvanheld
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Jan 21, 2020
Merge PR bioconda#19771, commits were: * readd test * Remove tests and update version num * add csv_xs package * add perl-text-csv * Add perl-file-sharedir-install * Add noarch * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes into perl-metabolomics-fragment-annotation-0.2.0 * Init perl-metabolomics-fragment-annotation with its version 0.2. * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (bioconda#17007) Remove 5 packages from the blacklist (bioconda#17004) Update validators to 0.14.0 (bioconda#17002) Update epic2 to 0.0.39 (bioconda#17003) Update r-seurat to 3.1.0 (bioconda#17001) Update bbknn to 1.3.5 (bioconda#15908) Update sra-tools to 2.10.0 (bioconda#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (bioconda#16999) Update ncbi-vdb to 2.10.0 (bioconda#16997) add r-immunedeconv (bioconda#16103) Update rgt to 0.12.2 (bioconda#16981) python-chado 2.3.0 (bioconda#16995) build spades from source (bioconda#16937) Update n50 to 0.83 (bioconda#16994) Update picard-slim to 2.20.6 (bioconda#16993) Update picard to 2.20.6 (bioconda#16992) bcftools polysomy (bioconda#16989) Update fastq-scan to 0.4.0 (bioconda#16991) Add Logomaker (bioconda#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (bioconda#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (bioconda#13805) we lost the dexseq_count script (bioconda#13806) Amptk (bioconda#13809) rebuild amptk (bioconda#13802) Sparc: add utilities (bioconda#13804) update wgbs snakepipes tools (bioconda#13793) Rebuild exonerate (bioconda#13686) Update Picard to 2.18.27. (bioconda#13795) Update to official release, add patch (bioconda#13791) Add PylProtPredictor (bioconda#13790) Update cgpbigwig to 1.0.3 (bioconda#13258) Update treetime to 0.5.3 (bioconda#13249) added shapeshifter-cli recipe (bioconda#13667) Update post-link.sh (bioconda#13767) v0.1.6 February 2019 Release (bioconda#13789) Add notes regarding binary name (bioconda#13762) update maaslin to version 0.0.5 (bioconda#13788) Gromacs 2018.6 patch (bioconda#13787) Use khronos opencl on osx (bioconda#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
BiocondaBot
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Jan 28, 2020
Merge PR #19895, commits were: * upgrade to 0.3.1 * updating perl package version to 0.3.0 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (86 commits) [ci skip] Merge PR 19885 Update pyranges to 0.0.69 (#19888) Update ppanggolin to 1.0.13 (#19887) [ci skip] Merge PR 19882 [ci skip] Merge PR 19884 [ci skip] Merge PR 19883 [ci skip] Merge PR 19876 [ci skip] Merge PR 19872 [ci skip] Merge PR 19873 [ci skip] Merge PR 19875 [ci skip] Merge PR 19877 [ci skip] Merge PR 19878 [ci skip] Merge PR 19879 Update coinfinder to 1.0.2 (#19869) [ci skip] Merge PR 19470 [ci skip] Merge PR 19868 Update tb-profiler to 2.8.4 (#19866) [ci skip] Merge PR 19864 Pychopper dependency update (#19865) Add recipe for velocyto.R (#19843) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19772 [ci skip] Merge PR 19773 MSGF+ version bump (#19769) * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19747 [ci skip] Merge PR 19768 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (2210 commits) [ci skip] Merge PR 19683 Update refgenconf to 0.6.2 (#19754) [ci skip] Merge PR 19762 [ci skip] Merge PR 19763 [ci skip] Merge PR 19760 [ci skip] Merge PR 19758 [ci skip] Merge PR 19744 [ci skip] Merge PR 19719 [ci skip] Merge PR 19751 [ci skip] Merge PR 19748 [ci skip] Merge PR 19757 [ci skip] Merge PR 19756 [ci skip] Merge PR 19753 [ci skip] Merge PR 19750 [ci skip] Merge PR 19743 [ci skip] Merge PR 19745 Update r-brio to 0.3.17 (#19662) Update kma to 1.2.21 (#19742) [ci skip] Merge PR 19739 [ci skip] Merge PR 19741 ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (#17007) Remove 5 packages from the blacklist (#17004) Update validators to 0.14.0 (#17002) Update epic2 to 0.0.39 (#17003) Update r-seurat to 3.1.0 (#17001) Update bbknn to 1.3.5 (#15908) Update sra-tools to 2.10.0 (#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (#16999) Update ncbi-vdb to 2.10.0 (#16997) add r-immunedeconv (#16103) Update rgt to 0.12.2 (#16981) python-chado 2.3.0 (#16995) build spades from source (#16937) Update n50 to 0.83 (#16994) Update picard-slim to 2.20.6 (#16993) Update picard to 2.20.6 (#16992) bcftools polysomy (#16989) Update fastq-scan to 0.4.0 (#16991) Add Logomaker (#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (#13805) we lost the dexseq_count script (#13806) Amptk (#13809) rebuild amptk (#13802) Sparc: add utilities (#13804) update wgbs snakepipes tools (#13793) Rebuild exonerate (#13686) Update Picard to 2.18.27. (#13795) Update to official release, add patch (#13791) Add PylProtPredictor (#13790) Update cgpbigwig to 1.0.3 (#13258) Update treetime to 0.5.3 (#13249) added shapeshifter-cli recipe (#13667) Update post-link.sh (#13767) v0.1.6 February 2019 Release (#13789) Add notes regarding binary name (#13762) update maaslin to version 0.0.5 (#13788) Gromacs 2018.6 patch (#13787) Use khronos opencl on osx (#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
BiocondaBot
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Feb 27, 2020
Merge PR #20566, commits were: * wrong sha256 * update recipe with 0.5.2 module version * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (537 commits) [ci skip] Merge PR 20549 [ci skip] Merge PR 20552 Update pgcgap to 1.0.12 (#20546) [ci skip] Merge PR 20538 Update rtg-tools to 3.11 (#20540) [ci skip] Merge PR 20537 [ci skip] Merge PR 20535 [ci skip] Merge PR 20533 [ci skip] Merge PR 20531 [ci skip] Merge PR 20532 [ci skip] Merge PR 20530 [ci skip] Merge PR 20527 [ci skip] Merge PR 20529 [ci skip] Merge PR 20523 [ci skip] Merge PR 20522 [ci skip] Merge PR 20516 [ci skip] Merge PR 20517 [ci skip] Merge PR 20526 [ci skip] Merge PR 20521 [ci skip] Merge PR 20524 ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (86 commits) [ci skip] Merge PR 19885 Update pyranges to 0.0.69 (#19888) Update ppanggolin to 1.0.13 (#19887) [ci skip] Merge PR 19882 [ci skip] Merge PR 19884 [ci skip] Merge PR 19883 [ci skip] Merge PR 19876 [ci skip] Merge PR 19872 [ci skip] Merge PR 19873 [ci skip] Merge PR 19875 [ci skip] Merge PR 19877 [ci skip] Merge PR 19878 [ci skip] Merge PR 19879 Update coinfinder to 1.0.2 (#19869) [ci skip] Merge PR 19470 [ci skip] Merge PR 19868 Update tb-profiler to 2.8.4 (#19866) [ci skip] Merge PR 19864 Pychopper dependency update (#19865) Add recipe for velocyto.R (#19843) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19772 [ci skip] Merge PR 19773 MSGF+ version bump (#19769) * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: [ci skip] Merge PR 19747 [ci skip] Merge PR 19768 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * 'master' of https://github.com/bioconda/bioconda-recipes: (2210 commits) [ci skip] Merge PR 19683 Update refgenconf to 0.6.2 (#19754) [ci skip] Merge PR 19762 [ci skip] Merge PR 19763 [ci skip] Merge PR 19760 [ci skip] Merge PR 19758 [ci skip] Merge PR 19744 [ci skip] Merge PR 19719 [ci skip] Merge PR 19751 [ci skip] Merge PR 19748 [ci skip] Merge PR 19757 [ci skip] Merge PR 19756 [ci skip] Merge PR 19753 [ci skip] Merge PR 19750 [ci skip] Merge PR 19743 [ci skip] Merge PR 19745 Update r-brio to 0.3.17 (#19662) Update kma to 1.2.21 (#19742) [ci skip] Merge PR 19739 [ci skip] Merge PR 19741 ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Bioconda Bot (464) and others # Via Devon Ryan * 'master' of https://github.com/bioconda/bioconda-recipes: (2408 commits) Update pyega3 to 3.0.39 (#17007) Remove 5 packages from the blacklist (#17004) Update validators to 0.14.0 (#17002) Update epic2 to 0.0.39 (#17003) Update r-seurat to 3.1.0 (#17001) Update bbknn to 1.3.5 (#15908) Update sra-tools to 2.10.0 (#16998) Add Unified Variant Analysis Pipeline (UVP) for M. tuberculosis analysis Update bbmap to 38.63 (#16999) Update ncbi-vdb to 2.10.0 (#16997) add r-immunedeconv (#16103) Update rgt to 0.12.2 (#16981) python-chado 2.3.0 (#16995) build spades from source (#16937) Update n50 to 0.83 (#16994) Update picard-slim to 2.20.6 (#16993) Update picard to 2.20.6 (#16992) bcftools polysomy (#16989) Update fastq-scan to 0.4.0 (#16991) Add Logomaker (#16990) ... * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes # By Devon Ryan (31) and others # Via GitHub * 'master' of https://github.com/bioconda/bioconda-recipes: (353 commits) pysradb: update to 0.8.0 (#13815) Update: r-basejump to 0.9.11 for bcbiornaseq compat (#13805) we lost the dexseq_count script (#13806) Amptk (#13809) rebuild amptk (#13802) Sparc: add utilities (#13804) update wgbs snakepipes tools (#13793) Rebuild exonerate (#13686) Update Picard to 2.18.27. (#13795) Update to official release, add patch (#13791) Add PylProtPredictor (#13790) Update cgpbigwig to 1.0.3 (#13258) Update treetime to 0.5.3 (#13249) added shapeshifter-cli recipe (#13667) Update post-link.sh (#13767) v0.1.6 February 2019 Release (#13789) Add notes regarding binary name (#13762) update maaslin to version 0.0.5 (#13788) Gromacs 2018.6 patch (#13787) Use khronos opencl on osx (#13786) ... * Merge branch 'perl-http-simple-fixing' * perl-http-simple-fixing: Add new test and dependancies * Add new test and dependancies
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Bioconda has finished the GCC7 migration. If you are dealing with C/C++ or Python package it can be that you need to rebuild other dependent packages. Bioconda utils - update-pinning will assist you with that. If you have any questions please use issue 13578.