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[ci skip] Merge PR 22707
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Merge PR #22707, commits were: 
 * Update meta.yaml
 * Update meta.yaml
 * Update meta.yaml
 * Merge branch 'master' into pgcgap
 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes
 * Update meta.yaml
 * Update meta.yaml
 * Update meta.yaml
 * Update meta.yaml
 * Debug why there are python host dependencies getting pulled in
 * Update meta.yaml
 * Update pgcgap to v1.0.18
 * Merge pull request #16 from bioconda/master

update local master
 * Merge pull request #14 from bioconda/master

Update local master
 * Merge pull request #9 from bioconda/master

update local
 * Merge pull request #7 from bioconda/master

update local master
 * Merge pull request #5 from bioconda/master

update local files
 * Merge pull request #3 from bioconda/master

update local fork
 * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes
 * Merge pull request #1 from bioconda/master

update local recipes
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Hualin Liu authored Jun 19, 2020
1 parent 1c19820 commit 99c59fc
Showing 1 changed file with 7 additions and 5 deletions.
12 changes: 7 additions & 5 deletions recipes/pgcgap/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
{% set name = "pgcgap" %}
{% set version = "1.0.17" %}
{% set version = "1.0.18" %}

package:
name: '{{ name }}'
version: '{{ version }}'

source:
url: https://github.com/liaochenlanruo/pgcgap/archive/v{{ version }}.tar.gz
sha256: b4a57daed31ce3cd781e3f4687bb5a896b01bb83172ab844edac9ad9f34e3947
sha256: d70c59635da62ef3ba57d7b0f1e07ca3be67388aa6c16930104714e5adac6ff0

build:
number: 0
Expand All @@ -19,7 +19,6 @@ requirements:
- perl-bioperl >=1.7.2
- perl-file-tee
- perl-sys-info

run:
- abricate
- canu >=1.8
Expand All @@ -46,6 +45,7 @@ requirements:
- fastani >=1.1
- fastp
- pal2nal
- perl
- perl-file-tee
- perl-data-dumper >=2.173
- perl-pod-usage >=1.69
Expand All @@ -56,9 +56,11 @@ requirements:
- htslib >=1.9
- snippy >=4.3.6
- sickle-trim >=1.33
- r-ggplot2 =3.1.1
- r-base
- r-ggplot2 >=3.1.1
- r-gplots
- r-corrplot
- python
- matplotlib-base
- scoary
- seaborn
Expand All @@ -67,7 +69,7 @@ requirements:
- biopython
- r-pheatmap
- r-plotrix
- unicycler =0.4.7
- unicycler 0.4.7
- wget
- coreutils

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