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clean up recipe
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mencian committed Sep 30, 2024
1 parent 0222d46 commit 88c41d7
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2 changes: 1 addition & 1 deletion recipes/genotyphi/build.sh
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Expand Up @@ -2,7 +2,7 @@

mkdir -p $PREFIX/bin
cp mappingbased/genotyphi.py $PREFIX/bin/genotyphi.py
ln -sf $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi
ln $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi
chmod +x $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi

# Add script for Mykrobe based analysis
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2 changes: 1 addition & 1 deletion recipes/genotyphi/meta.yaml
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Expand Up @@ -20,7 +20,7 @@ requirements:
host:
- wget
run:
- python <3
- python
- samtools >=1.1
- bcftools >=1.1
- pandas
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