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clean up recipe
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mencian committed Sep 30, 2024
1 parent f5551c7 commit 0222d46
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Showing 2 changed files with 5 additions and 3 deletions.
4 changes: 2 additions & 2 deletions recipes/genotyphi/build.sh
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@@ -1,8 +1,8 @@
#!/bin/bash

mkdir -p $PREFIX/bin
cp genotyphi.py $PREFIX/bin/genotyphi.py
ln $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi
cp mappingbased/genotyphi.py $PREFIX/bin/genotyphi.py
ln -sf $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi
chmod +x $PREFIX/bin/genotyphi.py $PREFIX/bin/genotyphi

# Add script for Mykrobe based analysis
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4 changes: 3 additions & 1 deletion recipes/genotyphi/meta.yaml
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Expand Up @@ -33,6 +33,8 @@ test:

about:
home: https://github.com/typhoidgenomics/genotyphi
license: GPL3
license: GPL-3.0-or-later
license_family: GPL3
license_file: LICENSE
summary: Assign genotypes to Salmonella Typhi genomes based on VCF files (mapped to Typhi CT18 reference genome)
dev_url: https://github.com/typhoidgenomics/genotyphi

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