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Merge PR #25392, commits were: * remove create test data (as workaround) for ``` Traceback (most recent call last): File "/home/circleci/project/miniconda/bin/bioconda-utils", line 8, in <module> sys.exit(main()) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/cli.py", line 971, in main bioconductor_skeleton, clean_cran_skeleton, autobump, bot File "/home/circleci/project/miniconda/lib/python3.7/site-packages/argh/dispatching.py", line 328, in dispatch_commands dispatch(parser, *args, **kwargs) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/argh/dispatching.py", line 174, in dispatch for line in lines: File "/home/circleci/project/miniconda/lib/python3.7/site-packages/argh/dispatching.py", line 277, in _execute_command for line in result: File "/home/circleci/project/miniconda/lib/python3.7/site-packages/argh/dispatching.py", line 260, in _call result = function(*positional, **keywords) File "<boltons.funcutils.FunctionBuilder-5>", line 2, in build File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/cli.py", line 130, in wrapper func(*args, **kwargs) File "<boltons.funcutils.FunctionBuilder-4>", line 2, in build File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/cli.py", line 59, in wrapper func(*args, **kwargs) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/cli.py", line 476, in build keep_old_work=keep_old_work) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/build.py", line 343, in build_recipes linter=linter) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/build.py", line 149, in build pkg_test.test_package(pkg_path, base_image=base_image) File "/home/circleci/project/miniconda/lib/python3.7/site-packages/bioconda_utils/pkg_test.py", line 170, in test_package p = utils.run(cmd, env=env, cwd=d, mask=False) File "/home/circleci/project/miniconda/lib/python3.7/tempfile.py", line 805, in __exit__ self.cleanup() File "/home/circleci/project/miniconda/lib/python3.7/tempfile.py", line 809, in cleanup _shutil.rmtree(self.name) File "/home/circleci/project/miniconda/lib/python3.7/shutil.py", line 485, in rmtree _rmtree_safe_fd(fd, path, onerror) File "/home/circleci/project/miniconda/lib/python3.7/shutil.py", line 423, in _rmtree_safe_fd _rmtree_safe_fd(dirfd, fullname, onerror) File "/home/circleci/project/miniconda/lib/python3.7/shutil.py", line 443, in _rmtree_safe_fd onerror(os.unlink, fullname, sys.exc_info()) File "/home/circleci/project/miniconda/lib/python3.7/shutil.py", line 441, in _rmtree_safe_fd os.unlink(entry.name, dir_fd=topfd) PermissionError: [Errno 13] Permission denied: 'Intervene_pairwise_frac_matrix.txt' ``` * add proper tests to intervene - remove/invert restriction on pandas which was fixed in 0.6.5 asntech/intervene#40 (comment) - running the tool outputs deprection warnings for matplotlib >= 3.4 .. so I added a version restriction
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