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Use bitmaps to reduce memory usage

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@johnlees johnlees released this 17 Feb 10:11
· 3 commits to master since this release

Includes three pull requests adding features from @santeripuranen:

  • #5: Use boost dynamic bitset to reduce memory usage in read mapping
  • #6: Offer compression of output files
  • #7: Improve installation

Other small changes:

  • All output is now written to stdout rather than stderr