reworked find events function again

alexrockhill · May 11, 2021 · fbf6bb3 · fbf6bb3
1 parent d350e31
commit fbf6bb3
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Showing 139 changed files with 1,235 additions and 1,342 deletions.
diff --git a/docs/.buildinfo b/docs/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 8fa198bde09b916326d48cfe1b849e55
+config: c5b9e2f24a174bb586a0c877268c62da
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/docs/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/docs/_downloads/3b9b6f3cd8645b6f7e8cdb8a4aee6517/plot_recover_events.py b/docs/_downloads/3b9b6f3cd8645b6f7e8cdb8a4aee6517/plot_recover_events.py
@@ -93,7 +93,7 @@
 # your own input depending on whether you want to keep the events or not.
 
 with mock.patch('builtins.input', return_value='y'):
-    pd_parser.parse_pd(fname, pd_event_name='Stim On', beh=beh,
+    pd_parser.parse_pd(fname, pd_event_name='Stim On', beh=beh, max_len=1.5,
                        pd_ch_names=['pd'], beh_key='time', recover=True)
 
 ###############################################################################
@@ -109,8 +109,8 @@
 # following the instructions.
 
 # reject the two false deflections in the middle of the second event
-with mock.patch('builtins.input', side_effect=['y'] + ['n'] * 2 + ['y'] * 2):
-    pd_parser.add_pd_off_events(fname, off_event_name='Stim Off')
+with mock.patch('builtins.input', side_effect=['n'] * 2 + ['y'] * 2):
+    pd_parser.add_pd_off_events(fname, max_len=1.5, off_event_name='Stim Off')
 
 ###############################################################################
 # Check the results

diff --git a/docs/_downloads/5258f1bb54b38679ec8488158187b98c/plot_recover_events.ipynb b/docs/_downloads/5258f1bb54b38679ec8488158187b98c/plot_recover_events.ipynb
@@ -62,7 +62,7 @@
       },
       "outputs": [],
       "source": [
-        "with mock.patch('builtins.input', return_value='y'):\n    pd_parser.parse_pd(fname, pd_event_name='Stim On', beh=beh,\n                       pd_ch_names=['pd'], beh_key='time', recover=True)"
+        "with mock.patch('builtins.input', return_value='y'):\n    pd_parser.parse_pd(fname, pd_event_name='Stim On', beh=beh, max_len=1.5,\n                       pd_ch_names=['pd'], beh_key='time', recover=True)"
       ]
     },
     {
@@ -80,7 +80,7 @@
       },
       "outputs": [],
       "source": [
-        "# reject the two false deflections in the middle of the second event\nwith mock.patch('builtins.input', side_effect=['y'] + ['n'] * 2 + ['y'] * 2):\n    pd_parser.add_pd_off_events(fname, off_event_name='Stim Off')"
+        "# reject the two false deflections in the middle of the second event\nwith mock.patch('builtins.input', side_effect=['n'] * 2 + ['y'] * 2):\n    pd_parser.add_pd_off_events(fname, max_len=1.5, off_event_name='Stim Off')"
       ]
     },
     {

diff --git a/docs/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/docs/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/docs/_images/event_diffs.png b/docs/_images/event_diffs.png
diff --git a/docs/_images/excluded_events.png b/docs/_images/excluded_events.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_002.png b/docs/_images/sphx_glr_plot_recover_events_002.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_003.png b/docs/_images/sphx_glr_plot_recover_events_003.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_004.png b/docs/_images/sphx_glr_plot_recover_events_004.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_005.png b/docs/_images/sphx_glr_plot_recover_events_005.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_006.png b/docs/_images/sphx_glr_plot_recover_events_006.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_007.png b/docs/_images/sphx_glr_plot_recover_events_007.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_008.png b/docs/_images/sphx_glr_plot_recover_events_008.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_009.png b/docs/_images/sphx_glr_plot_recover_events_009.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_010.png b/docs/_images/sphx_glr_plot_recover_events_010.png
diff --git a/docs/_images/sphx_glr_plot_recover_events_011.png b/docs/_images/sphx_glr_plot_recover_events_011.png
diff --git a/docs/_modules/index.html b/docs/_modules/index.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Overview: module code &#8212; pd-parser v0.5 documentation</title>
+    <title>Overview: module code &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="../_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="../index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>
 

diff --git a/docs/_modules/parse_pd.html b/docs/_modules/parse_pd.html
diff --git a/docs/_sources/auto_examples/plot_recover_events.rst.txt b/docs/_sources/auto_examples/plot_recover_events.rst.txt
diff --git a/docs/_sources/auto_examples/sg_execution_times.rst.txt b/docs/_sources/auto_examples/sg_execution_times.rst.txt
@@ -5,10 +5,10 @@
 
 Computation times
 =================
-**00:38.796** total execution time for **auto_examples** files:
+**00:35.956** total execution time for **auto_examples** files:
 
 +-------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_auto_examples_plot_recover_events.py` (``plot_recover_events.py``)         | 00:38.796 | 0.0 MB |
+| :ref:`sphx_glr_auto_examples_plot_recover_events.py` (``plot_recover_events.py``)         | 00:35.956 | 0.0 MB |
 +-------------------------------------------------------------------------------------------+-----------+--------+
 | :ref:`sphx_glr_auto_examples_plot_find_audio_events.py` (``plot_find_audio_events.py``)   | 00:00.000 | 0.0 MB |
 +-------------------------------------------------------------------------------------------+-----------+--------+

diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: 'v0.5',
+    VERSION: 'v0.6',
     LANGUAGE: 'None',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/api.html b/docs/api.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>API Documentation &#8212; pd-parser v0.5 documentation</title>
+    <title>API Documentation &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>
 

diff --git a/docs/auto_examples/index.html b/docs/auto_examples/index.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Examples Gallery &#8212; pd-parser v0.5 documentation</title>
+    <title>Examples Gallery &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="../_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="../index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>
 

diff --git a/docs/auto_examples/plot_find_audio_events.html b/docs/auto_examples/plot_find_audio_events.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Use Audio to Align Video Data &#8212; pd-parser v0.5 documentation</title>
+    <title>Use Audio to Align Video Data &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="../_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="../index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>
 

diff --git a/docs/auto_examples/plot_find_pd_events.html b/docs/auto_examples/plot_find_pd_events.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Find Photodiode Events &#8212; pd-parser v0.5 documentation</title>
+    <title>Find Photodiode Events &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="../_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="../index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>
 

diff --git a/docs/auto_examples/plot_find_pd_on_and_off.html b/docs/auto_examples/plot_find_pd_on_and_off.html
@@ -4,7 +4,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Find Photodiode On and Off Events &#8212; pd-parser v0.5 documentation</title>
+    <title>Find Photodiode On and Off Events &#8212; pd-parser v0.6 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/bootstrap-sphinx.css" type="text/css" />
     <link rel="stylesheet" type="text/css" href="../_static/gallery.css" />
@@ -40,7 +40,7 @@
           <span class="icon-bar"></span>
         </button>
         <a class="navbar-brand" href="../index.html">
-          pd-parser v0.5</a>
+          pd-parser v0.6</a>
         <span class="navbar-text navbar-version pull-left"><b></b></span>
       </div>