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252 Open 918 Closed
252 Open 918 Closed
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Issues list

Memory allocation error and abnormal termination, OS return value: -6
#1404 opened Oct 29, 2024 by vivaxp5
1 task done
spades-hammer error : OS return value: -6 io Input / output (e.g. due to disk storage) errors
#1402 opened Oct 28, 2024 by AmaliT
1 task done
1
spades-hammer finishing with abnormally, OS return value: -7 but with an (possibly) error message saying 'None' after 'writing down entries'
#1400 opened Oct 25, 2024 by jfy133
1 task done
2
system call for:ERRORs
#1396 opened Oct 14, 2024 by WJW024958
1 task done
1
How to generate an agp file from the scaffolds of spades?
#1389 opened Oct 8, 2024 by Bio-finder
2
Spades hammer error input Errors due to invalid / malformed / unsuitable input
#1387 opened Oct 2, 2024 by zafranulhaq12
1 task done
7
SPAdes is running abnormally, with some errors. io Input / output (e.g. due to disk storage) errors log Errors explained in the log file
#1385 opened Sep 27, 2024 by TAXICANI
1 task done
1
mimalloc: warning: unable to allocate aligned OS memory directly, fall back to over-allocation question
#1384 opened Sep 25, 2024 by ranweiwei66
1 task done
1
mmap2 and memory
#1383 opened Sep 24, 2024 by gnasseruncc
1 task done
os return value: 1
#1378 opened Sep 16, 2024 by LaurenceHdL
1 task done
OS return value: -7
#1376 opened Sep 16, 2024 by LaurenceHdL
1 task done
1
spades problem
#1374 opened Sep 16, 2024 by ayan-bt
1 task done
1
Ideas for Assembling an Extremely Large Dataset
#1373 opened Sep 13, 2024 by howla1ke
1
OS return value: 4
#1371 opened Sep 13, 2024 by rows0
1 task
2
Segmentation fault during Kmer counting for metaplasmidSPAdes: Only for a few samples
#1368 opened Sep 12, 2024 by Las02
1 task done
== Error == system call for: "['spades-core', 'K55/configs/config.info']" finished abnormally, OS return value: -7
#1363 opened Aug 28, 2024 by dozhun
1 task done
1
OS return value: -9
#1356 opened Aug 19, 2024 by Wanli-HE
1 task done
5
spades-core: /spades/assembler/src/common/assembly_graph/core/debruijn_data.hpp:38: void debruijn_graph::CoverageData::inc_coverage(int): Assertion `value >= 0 || coverage_ > unsigned(-value)' failed.
#1351 opened Aug 10, 2024 by Amandkaur
1 task done
1
Minority mutations used for final assembly (metaspades, hybrid ONT-SR)
#1350 opened Aug 9, 2024 by lborcard
1 task done
4
core dump when runing pathracer
#1346 opened Jul 30, 2024 by yjk-bertrand
1 task done
2
Linux build does not run in a directory containing spaces
#1339 opened Jul 19, 2024 by biomatters-thomas
1 task done
== Error == system call for: spades-core, finished abnormally, OS return value: -9
#1338 opened Jul 18, 2024 by RJEGR
1 task done
1
OS return value: -9
#1336 opened Jul 17, 2024 by Wanli-HE
1 task done
5
Error == system call for: config.info
#1331 opened Jul 8, 2024 by anaalmeidasantos
1 task done
4
Incompatible licenses
#1330 opened Jul 5, 2024 by pgrt
1 task done
1
ProTip! no:milestone will show everything without a milestone.