Error for unrecognized lift manifest fields.

CHANGES.md

@@ -1,5 +1,10 @@
 # Release Notes
 
+## 0.2.2
+
+Unrecognized lift manifest configuration data now generates an informative error instead of
+silently skipping the unrecognized configuration.
+
 ## 0.2.1
 
 Fix command descriptions not being rendered in the JSON lift manifest of built scies.

lift.toml

@@ -40,4 +40,4 @@ remove_re = [
 ]
 [lift.commands.env.replace]
 SHIV_ROOT = "{scie.bindings}/shiv_root"
-SCIENCE_DOC_LOCAL = "{docsite}/index.html"
+SCIENCE_DOC_LOCAL = "{docsite}"

science/__init__.py

@@ -3,6 +3,6 @@
 
 from packaging.version import Version
 
-__version__ = "0.2.1"
+__version__ = "0.2.2"
 
 VERSION = Version(__version__)

science/config.py

@@ -3,6 +3,7 @@
 
 from __future__ import annotations
 
+import os
 import tomllib
 from collections import OrderedDict
 from dataclasses import dataclass
@@ -45,7 +46,7 @@ def parse_config_str(config: str) -> Application:
 
 def parse_build_info(data: Data) -> BuildInfo:
     return BuildInfo.gather(
-        lift_toml=data.provenance, app_info=data.get_data("app_info", default={}).data
+        lift_toml=data.provenance, app_info=data.get_data("app_info", default={}, used=True).data
     )
 
 
@@ -102,9 +103,22 @@ def parse_interpreter_group(ig_data: Data) -> InterpreterGroup:
             interpreters=[interpreters_by_id[Identifier(member)] for member in members],
         )
 
-    return parse_dataclass(
+    application = parse_dataclass(
         lift,
         Application,
         interpreters=tuple(interpreters_by_id.values()),
         custom_parsers={BuildInfo: parse_build_info, InterpreterGroup: parse_interpreter_group},
     )
+
+    unused_items = list(lift.iter_unused_items())
+    if unused_items:
+        eol = os.linesep
+        raise InputError(
+            f"The following `lift` manifest entries in {data.provenance.source} were not recognized:{eol}"
+            f"{os.linesep.join(key for key, _ in unused_items)}{eol}"
+            f"{eol}"
+            "Refer to the lift manifest format specification at https://science.scie.app/manifest.html or by "
+            "running `science doc open manifest`."
+        )
+
+    return application

science/data.py

@@ -3,11 +3,11 @@
 
 from __future__ import annotations
 
+import dataclasses
 import os
-from collections import OrderedDict
 from dataclasses import dataclass
 from enum import Enum, auto
-from typing import Any, Collection, Mapping, TypeVar, cast
+from typing import Any, Collection, Iterator, Mapping, TypeVar
 
 from science.errors import InputError
 from science.frozendict import FrozenDict
@@ -16,11 +16,15 @@
 _T = TypeVar("_T")
 
 
-@dataclass(frozen=True)
+@dataclass
 class Data:
     provenance: Provenance
     data: FrozenDict[str, Any]
     path: str = ""
+    _unused_data: dict[str, Any] = dataclasses.field(init=False)
+
+    def __post_init__(self) -> None:
+        self._unused_data = dict(self.data)
 
     def config(self, key: str) -> str:
         return f"`[{self.path}] {key}`" if self.path else f"`[{key}]`"
@@ -30,15 +34,20 @@ class Required(Enum):
 
     REQUIRED = Required.VALUE
 
-    def get_data(self, key: str, default: dict[str, Any] | Required = REQUIRED) -> Data:
-        data = self.get_value(
-            key, expected_type=Mapping, default=default  # type: ignore[type-abstract]
+    def get_data(
+        self, key: str, default: dict[str, Any] | Required = REQUIRED, used: bool = False
+    ) -> Data:
+        raw_data = self.get_value(
+            key, expected_type=Mapping, default=default, used=used  # type: ignore[type-abstract]
         )
-        return Data(
+        data = Data(
             provenance=self.provenance,
-            data=FrozenDict(data),
+            data=FrozenDict(raw_data),
             path=f"{self.path}.{key}" if self.path else key,
         )
+        if not used:
+            self._unused_data[key] = data
+        return data
 
     def get_str(self, key: str, default: str | Required = REQUIRED) -> str:
         return self.get_value(key, expected_type=str, default=default)
@@ -57,49 +66,72 @@ def get_list(
         key: str,
         expected_item_type: type[_T],
         default: list[_T] | Required = REQUIRED,
+        used: bool = True,
     ) -> list[_T]:
         value = self.get_value(
-            key, expected_type=Collection, default=default  # type: ignore[type-abstract]
-        )
-        invalid_entries = OrderedDict(
-            (index, item)
-            for index, item in enumerate(value, start=1)
-            if not isinstance(item, expected_item_type)
+            key, expected_type=Collection, default=default, used=used  # type: ignore[type-abstract]
         )
+
+        items = []
+        invalid_entries = {}
+        for index, item in enumerate(value, start=1):
+            if isinstance(item, expected_item_type):
+                items.append(item)
+            else:
+                # As a last resort, see if the item is convertible to the expected_item_type via its constructor. This
+                # supports Enum and similar types.
+                try:
+                    items.append(expected_item_type(item))  # type: ignore[call-arg]
+                except (TypeError, ValueError):
+                    invalid_entries[index] = item
+
         if invalid_entries:
             invalid_items = [
                 f"item {index}: {item} of type {self._typename(type(item))}"
                 for index, item in invalid_entries.items()
             ]
+            expected_values = ""
+            if issubclass(expected_item_type, Enum):
+                expected_values = f" from {{{', '.join(repr(expected.value) for expected in expected_item_type)}}}"
+
             raise InputError(
                 f"Expected {self.config(key)} defined in {self.provenance.source} to be a list "
-                f"with items of type {self._typename(expected_item_type)} but got "
+                f"with items of type {self._typename(expected_item_type)}{expected_values} but got "
                 f"{len(invalid_entries)} out of {len(value)} entries of the wrong type:{os.linesep}"
                 f"{os.linesep.join(invalid_items)}"
             )
-        return cast(list[_T], value)
+        return items
 
     def get_data_list(
         self,
         key: str,
         default: list[dict] | Required = REQUIRED,
     ) -> list[Data]:
-        return [
+        data_list = [
             Data(
                 provenance=self.provenance,
                 data=FrozenDict(data),
                 path=f"{self.path}.{key}[{index}]" if self.path else key,
             )
             for index, data in enumerate(
-                self.get_list(key, expected_item_type=Mapping, default=default), start=1
+                self.get_list(key, expected_item_type=Mapping, default=default, used=False), start=1
             )
         ]
+        if data_list:
+            self._unused_data[key] = data_list
+        return data_list
 
     @staticmethod
     def _typename(type_: type) -> str:
         return "toml table" if issubclass(type_, Mapping) else type_.__name__
 
-    def get_value(self, key: str, expected_type: type[_T], default: _T | Required = REQUIRED) -> _T:
+    def get_value(
+        self,
+        key: str,
+        expected_type: type[_T],
+        default: _T | Required = REQUIRED,
+        used: bool = True,
+    ) -> _T:
         if key not in self.data:
             if default is self.REQUIRED:
                 raise InputError(
@@ -114,7 +146,21 @@ def get_value(self, key: str, expected_type: type[_T], default: _T | Required =
                 f"Expected a {self._typename(expected_type)} for {self.config(key)} but found "
                 f"{value} of type {self._typename(type(value))} in {self.provenance.source}."
             )
+        if used:
+            self._unused_data.pop(key, None)
         return value
 
+    def iter_unused_items(self) -> Iterator[tuple[str, Any]]:
+        for key, value in self._unused_data.items():
+            if isinstance(value, list) and all(isinstance(item, Data) for item in value):
+                for index, item in enumerate(value, start=1):
+                    for sub_key, sub_value in item.iter_unused_items():
+                        yield f"{key}[{index}].{sub_key}", sub_value
+            elif isinstance(value, Data):
+                for sub_key, sub_value in value.iter_unused_items():
+                    yield f"{key}.{sub_key}", sub_value
+            else:
+                yield key, value
+
     def __bool__(self):
         return bool(self.data)

science/dataclass/deserializer.py

@@ -54,40 +54,43 @@ def _parse_field(
 
     if map_type := type_.issubtype(Mapping):
         # default is Env
-        data_value = data.get_data(name, default=cast(dict[str, Any] | Data.Required, default))
+        data_value = data.get_data(
+            name, default=cast(dict[str, Any] | Data.Required, default), used=True
+        )
         # We assume any mapping type used will be constructible with a single dict argument.
         return cast(_F, map_type(data_value.data))
 
     if type_.issubtype(Collection) and not type_.issubtype(str):
         item_type = type_.item_type
+        items: list[Any] = []
         if dataclasses.is_dataclass(item_type) or isinstance(item_type, Mapping):
             data_list = data.get_data_list(name, default=cast(list | Data.Required, default))
+
             if isinstance(item_type, Mapping):
-                return cast(
-                    _F,
-                    [
-                        # We assume any mapping type used will be constructible with a single dict
-                        # argument.
-                        cast(Mapping, item_type(data_item.data))  # type: ignore[misc]
-                        for data_item in data_list
-                    ],
+                items.extend(
+                    # We assume any mapping type used will be constructible with a single dict
+                    # argument.
+                    cast(_F, item_type(data_item.data))  # type: ignore[misc]
+                    for data_item in data_list
                 )
             else:
-                return cast(
-                    _F,
-                    [
-                        parse(data_item, item_type, custom_parsers=custom_parsers)
-                        for data_item in data_list
-                    ],
+                items.extend(
+                    parse(data_item, item_type, custom_parsers=custom_parsers)
+                    for data_item in data_list
                 )
         else:
-            return cast(
-                _F,
+            items.extend(
                 data.get_list(
                     name, expected_item_type=item_type, default=cast(list | Data.Required, default)
-                ),
+                )
             )
 
+        if type_.has_origin_type and (origin_type := type_.origin_type) is not list:
+            # I.E.: tuple, frozenset, etc.
+            return origin_type(items)  # type: ignore[call-arg]
+
+        return cast(_F, items)
+
     value = data.get_value(name, expected_type=object, default=default)
     if value is default:
         return cast(_F, value)
@@ -121,7 +124,7 @@ def _parse_field(
 
 
 def parse(
-    data,
+    data: Data,
     data_type: type[_D],
     *,
     custom_parsers: Mapping[type, typing.Callable[[Data], Any]] = FrozenDict(),

science/exe.py

@@ -15,10 +15,11 @@
 import textwrap
 import traceback
 from io import BytesIO
-from pathlib import Path
+from pathlib import Path, PurePath
 from textwrap import dedent
 from types import TracebackType
 from typing import BinaryIO
+from urllib.parse import urlparse, urlunparse
 
 import click
 import click_log
@@ -199,10 +200,22 @@ def _doc(ctx: click.Context, site: str, local: Path | None) -> None:
         """
     ),
 )
+@click.argument("page", default=None, required=False)
 @pass_doc
-def _open_doc(doc: DocConfig, remote: bool) -> None:
-    """Opens the local documentation in a browser."""
-    click.launch(doc.site if remote else f"file://{doc.local}")
+def _open_doc(doc: DocConfig, remote: bool, page: str | None = None) -> None:
+    """Opens the local documentation in a browser.
+
+    If an optional page argument is supplied, that page will be opened instead of the default doc site page.
+    """
+    url = doc.site if remote else f"file://{doc.local}"
+    if not page:
+        if not remote:
+            url = f"{url}/index.html"
+    else:
+        url_info = urlparse(url)
+        page = f"{page}.html" if not PurePath(page).suffix else page
+        url = urlunparse(url_info._replace(path=f"{url_info.path}/{page}"))
+    click.launch(url)
 
 
 @_main.group(cls=DYMGroup, name="provider")

science/model.py

@@ -487,8 +487,8 @@ class Application(Dataclass):
     interpreters: tuple[Interpreter, ...] = ()
     interpreter_groups: tuple[InterpreterGroup, ...] = ()
     files: tuple[File, ...] = ()
-    commands: frozenset[Command] = frozenset()
-    bindings: frozenset[Command] = frozenset()
+    commands: tuple[Command, ...] = ()
+    bindings: tuple[Command, ...] = ()
     scie_jump: ScieJump | None = None
     ptex: Ptex | None = None
 

tests/data/interpreter-groups.toml

@@ -2,7 +2,7 @@
 name = "igs"
 description = "Test interpreter group selection."
 
-[lift.scie-jump]
+[lift.scie_jump]
 version = "0.11.0"
 
 [[lift.interpreters]]