Merge pull request #1 from VDBWRAIR/necrolyte2-install

Will fix the names of files after merging
VDBWRAIR · Feb 2, 2016 · 8bac710 · 8bac710
2 parents 6ea10a8 + a4c4cc4
commit 8bac710
Show file tree

Hide file tree

Showing 2 changed files with 21 additions and 0 deletions.
diff --git a/README.md b/README.md
@@ -1 +1,19 @@
 # BioFramework
+
+# Setup/Install
+
+1. Install miniconda
+
+   ```
+   wget https://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O conda.sh
+   bash conda.sh -p myconda
+   export PATH=${PWD}/myconda/bin:$PATH
+   conda config --add channels r
+   conda config --add channels bioconda
+   ```
+
+2. Install required software
+
+   ```
+   conda install --file requirements.txt
+   ```
diff --git a/requirements.txt b/requirements.txt
@@ -0,0 +1,3 @@
+bwa
+samtools
+cutadapt