Updated *_mthds.R and invitrodb to reflect new method desc #103
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…odb for the following *_mthds.R files: sc1, sc2, mc2, mc3, mc4, mc5, and mc6. Removed bmed.aeid.lowconc.twells, no.gnls.fit, and nmad.apid.null.zwells and unused commented out functions from from mc4_mthds.R to align with invitrodb.
R/mc5_mthds.R
Outdated
| #' \item{log10_2}{Add a cutoff value of log10(2).} | ||
| #' \item{neglog2_0.88}{Add a cutoff value of -1*log2(0.88).} | ||
| #' \item{bmad3}{Add a cutoff value of 3 multiplied by the baseline median absolute deviation | ||
| #' (bmad). By default, bmad is calculated using test compound wells (wllt = t) for the endpoint.} |
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This by default sentence only applies to single conc. Could replace as "Add a cutoff value of 3 multiplied by the baseline median absolute deviation (bmad) as defined at Level 4."
Updated descriptions for level 6 flags in mc6_mthds.R to reflect new descriptions in invitrodb. Added self to contributor list in "DESCRIPTION"
brown-jason
requested changes
Jul 27, 2023
Rendered documents using devtools::document() to update the manual.
cthunes
requested changes
Jul 27, 2023
…corresponding rendered manual.
madison-feshuk
approved these changes
Jul 31, 2023
# added to line 261
brown-jason
approved these changes
Jul 31, 2023
cthunes
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Jul 31, 2023
Ashley-Ko
deleted the
25-update-tcpl-methods-table-descriptions-and-documentation
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Updated method descriptions to reflect new descriptions now in invitrodb for the following *_mthds.R files: sc1, sc2, mc2, mc3, mc4, mc5, and mc6.
Removed bmed.aeid.lowconc.twells, no.gnls.fit, and nmad.apid.null.zwells and unused commented out functions from from mc4_mthds.R to align with invitrodb.