Pipeline for identifying viral integration reads from NGS data. This repo contains a WDL script for running ViFi.
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Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.
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TrinityCTAT/ViFi
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Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.
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- Python 68.0%
- Perl 23.7%
- Shell 3.5%
- WDL 2.7%
- Dockerfile 2.1%