fix: update reference to Human-GEM compartment

based on SysBioChalmers/Human-GEM#341
SysBioChalmers · Jun 7, 2022 · 9df2141 · 9df2141
1 parent fcb7d6a
commit 9df2141
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/ecHumanGEM/scripts/changeMedia_batch.m b/ecHumanGEM/scripts/changeMedia_batch.m
@@ -116,7 +116,7 @@
     unusedMets = [];
     for i=1:length(mediaComps)
         %Get metabolite indx
-        metIndx = getIndexes(model,strcat(mediaComps{i},'[s]'),'metcomps');
+        metIndx = getIndexes(model,strcat(mediaComps{i},'[e]'),'metcomps');
         %Get rxns for metabolite
         metRxns = find(model.S(metIndx,:));
         %Get the uptake reaction for the metabolite