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Fix Duplicate Octanoyl-CoA Beta-Oxidation Reactions #751

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merged 8 commits into from
Dec 23, 2023
Merged

Fix Duplicate Octanoyl-CoA Beta-Oxidation Reactions #751

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91d3496
fix: remove MAR06329 for being redundant with MAR03149 + MAR03150 + M…
Devlin-Moyer Dec 8, 2023
9955c41
fix: remove MAR06283 for being redundant with MAR03156 + MAR03157 + M…
Devlin-Moyer Dec 8, 2023
b281b49
fix: remove MAR06279 for being redundant with MAR03157 + MAR03158 + M…
Devlin-Moyer Dec 8, 2023
df8c072
fix: remove MAR05449 for being redundant with MAR03163 + MAR03164 + M…
Devlin-Moyer Dec 8, 2023
08aa570
fix: remove MAR01009 for being redundant with MAR03885 and MAR03149,5…
Devlin-Moyer Dec 8, 2023
1c2060b
chore: merge in latest develop branch
Devlin-Moyer Dec 14, 2023
bb85eec
chore: resolved merge conflicts with latest develop branch
Devlin-Moyer Dec 18, 2023
702fa11
doc: update rxnRetired column for MAR03160
haowang-bioinfo Dec 22, 2023
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5 changes: 5 additions & 0 deletions data/deprecatedIdentifiers/deprecatedReactions.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -262,6 +262,11 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR04239" "R01933" "2OXOADOXm" "R01933M" "r0448" "" "2OXOADOXm" "MNXR94818" "HMR_4239" "RCR11332" "" 0 "RHEA:30796" "RHEA:30795" "HMR_4239"
"MAR04940" "" "" "" "r0885" "" "r0885" "MNXR105402" "HMR_4940" "RCR20265" "2.A.29.2.7" 0 "" "" "HMR_4940"
"MAR06391" "" "" "" "r2520" "" "r2520" "MNXR106328" "HMR_6391" "RCR20063" "" 0 "" "" "HMR_6391"
"MAR06329" "" "FAOXC8C6m" "" "" "" "FAOXC8C6m" "" "" "" "" 0 "" "" "FAOXC8C6m"
"MAR06283" "" "FAOXC6C4m" "" "" "" "FAOXC6C4m" "" "" "" "" 0 "" "" "FAOXC6C4m"
"MAR06279" "" "FAOXC61C4m" "" "" "" "FAOXC61C4m" "" "" "" "" 0 "" "" "FAOXC61C4m"
"MAR05449" "" "FAOXC4020m" "" "" "" "FAOXC4C2m" "MNXR99368" "" "" "" 0 "" "" "FAOXC4C2m"
"MAR01009" "" "FAOXC80" "" "" "" "FAOXC80" "MNXR99373" "" "" "" 0 "" "" "FAOXC80"
"MAR02532" "" "RE0702M" "" "" "" "RE0702M" "MNXR103471" "" "" "" 0 "" "" "RE0702M"
"MAR02534" "" "RE0702N" "" "" "" "RE0702N" "MNXR103471" "" "" "" 0 "" "" "RE0702N"
"MAR03748" "R01210" "OIVD2m" "R03171M" "r0600" "" "OIVD2m" "MNXR102173;MNXR107999" "HMR_3748" "RCR14420" "" 0 "" "RHEA:13997" "HMR_3748"
Expand Down
116 changes: 0 additions & 116 deletions model/Human-GEM.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -222298,29 +222298,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR01009"
- name: "Beta Oxidation of Med/Long Chain Fatty Acid"
- metabolites: !!omap
- MAM01261m: 4
- MAM01597m: -3
- MAM01802m: -3
- MAM01803m: 3
- MAM02039m: 3
- MAM02040m: -3
- MAM02552m: -3
- MAM02553m: 3
- MAM02644m: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000117054 or ENSG00000122971"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "1.3.99.3"
- references: "PMID:2565344;PMID:3035565"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR01012"
- name: "Fatty Acyl Coenzyme A Synthase (N-C10:0CoA)"
Expand Down Expand Up @@ -241521,29 +241498,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR05449"
- name: "Fatty Acid Beta Oxidation (C4->C2), Mitochondrial"
- metabolites: !!omap
- MAM01261m: 2
- MAM01412m: -1
- MAM01597m: -1
- MAM01802m: -1
- MAM01803m: 1
- MAM02039m: 1
- MAM02040m: -1
- MAM02552m: -1
- MAM02553m: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000122971 and ENSG00000127884 and ENSG00000138796 and ENSG00000167315"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- references: "PMID:20195903;PMID:20490924;PMID:17143551"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR05456"
- name: "Succ->C4Dcc"
Expand Down Expand Up @@ -241640,28 +241594,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06279"
- name: "Fatty Acid Beta Oxidation (C6:1->C4:0), Mitochondrial"
- metabolites: !!omap
- MAM00053m: -1
- MAM01261m: 1
- MAM01412m: 1
- MAM01597m: -1
- MAM02039m: 1
- MAM02040m: -1
- MAM02552m: -1
- MAM02553m: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000127884 and ENSG00000138796 and ENSG00000167315"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- references: "PMID:20195903;PMID:20490924;PMID:17143551"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06280"
- name: "Fatty Acid Beta Oxidation (C6:1->C4:0), Peroxisomal"
Expand Down Expand Up @@ -241716,30 +241648,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06283"
- name: "Fatty Acid Beta Oxidation (C6->C4), Mitochondrial"
- metabolites: !!omap
- MAM01261m: 1
- MAM01412m: 1
- MAM01597m: -1
- MAM01802m: -1
- MAM01803m: 1
- MAM02039m: 1
- MAM02040m: -1
- MAM02122m: -1
- MAM02552m: -1
- MAM02553m: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000117054 and ENSG00000127884 and ENSG00000138796 and ENSG00000167315"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- references: "PMID:20195903;PMID:20490924;PMID:17143551"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06284"
- name: "Fatty Acid Beta Oxidation (C6->C4), Peroxisomal"
Expand Down Expand Up @@ -241860,30 +241768,6 @@
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06329"
- name: "Fatty Acid Beta Oxidation (C8->C6), Mitochondrial"
- metabolites: !!omap
- MAM01261m: 1
- MAM01597m: -1
- MAM01802m: -1
- MAM01803m: 1
- MAM02039m: 1
- MAM02040m: -1
- MAM02122m: 1
- MAM02552m: -1
- MAM02553m: 1
- MAM02644m: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000117054 and ENSG00000127884 and ENSG00000138796 and ENSG00000167315"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: ""
- references: "PMID:20195903;PMID:20490924;PMID:17143551"
- subsystem:
- "Fatty acid oxidation"
- confidence_score: 0
- !!omap
- id: "MAR06344"
- name: "Fatty Acid Beta Oxidation (C8->C6), Peroxisomal"
Expand Down
29 changes: 12 additions & 17 deletions model/reactions.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -178,7 +178,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00719" "R08198" "" "" "" "" "HMR_0719" "MNXR111769" "HMR_0719" "RCR11097" "" 0 "" "RHEA:13449" "HMR_0719"
"MAR01434" "R00238" "ACACT1r" "R00238M" "r0069" "" "ACACT1r" "MNXR95194" "HMR_1434" "RCR10465" "" 0 "RHEA:21039" "RHEA:21036" "HMR_1434"
"MAR01436" "R01357" "AACOAT" "R01357M" "r0320" "" "AACOAT" "MNXR95136" "HMR_1436" "RCR10466" "" 0 "RHEA:16118" "RHEA:16117" "HMR_1436"
"MAR03163" "R01175" "ACOAD1fm;HMR_3426" "" "" "R-HSA-77319" "ACOAD1fm;HMR_3422;HMR_3426" "MNXR95302" "HMR_3163;HMR_3422;HMR_3426" "RCR11098;RCR12667;RCR12671" "" 0 "" "RHEA:24004" "HMR_3163;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03163" "R01175" "ACOAD1fm;FAOXC4020m;FAOXC80;HMR_3426" "" "" "R-HSA-77319" "ACOAD1fm;FAOXC4C2m;FAOXC80;HMR_3422;HMR_3426" "MNXR95302" "HMR_3163;HMR_3422;HMR_3426" "RCR11098;RCR12667;RCR12671" "" 0 "" "RHEA:24004" "HMR_3163;FAOXC4C2m;MAR05449;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR04461" "R01361" "BDHm" "R01361C" "r0323" "" "BDHm" "MNXR96232" "HMR_4461" "RCR10467" "" 0 "RHEA:20524" "RHEA:20521" "HMR_4461"
"MAR04604" "R01978" "" "R01978C" "r0463" "" "r0463" "MNXR100660;MNXR107257" "HMR_4604" "RCR11099" "" 0 "" "RHEA:10188" "HMR_4604"
"MAR05351" "R01000" "" "" "" "" "2HBO" "MNXR94796" "HMR_5351" "RCR10152" "" 0 "" "RHEA:36371" "HMR_5351"
Expand Down Expand Up @@ -740,9 +740,9 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR08026" "" "LYSMTF2n" "" "" "" "LYSMTF2n" "MNXR101260" "HMR_8026" "RCR11349" "" 0 "" "" "HMR_8026"
"MAR08027" "R04867" "LYSMTF3n" "" "" "" "LYSMTF3n" "MNXR101261" "HMR_8027" "RCR11350" "" 0 "" "RHEA:54200" "HMR_8027"
"MAR08029" "" "PLYSPSer" "" "" "" "PLYSPSer" "MNXR103039" "HMR_8029" "RCR14338" "" 0 "" "" "HMR_8029"
"MAR03164" "R03026" "ECOAH1m;HMR_3426" "R03026M" "r0588" "" "ECOAH1m;HMR_3422;HMR_3426" "MNXR97883" "HMR_3164;HMR_3422;HMR_3426" "RCR11351;RCR12667;RCR12671" "" 0 "" "RHEA:26558" "HMR_3164;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03166" "R01975" "HACD1m;HMR_3426" "R01975M" "r0460" "" "HACD1m;HMR_3422;HMR_3426" "MNXR100541" "HMR_3166;HMR_3422;HMR_3426" "RCR11352;RCR12667;RCR12671" "" 0 "" "RHEA:30799" "HMR_3166;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03885" "R00238" "ACACT1m;HMR_3426" "R00238M" "r0070" "" "ACACT1rm;HMR_3422;HMR_3426" "MNXR95194" "HMR_3885;HMR_3422;HMR_3426" "RCR10247;RCR12667;RCR12671" "" 0 "RHEA:21039" "RHEA:21036" "HMR_3885;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03164" "R03026" "ECOAH1m;FAOXC4020m;FAOXC80;HMR_3426" "R03026M" "r0588" "" "ECOAH1m;FAOXC4C2m;FAOXC80;HMR_3422;HMR_3426" "MNXR97883" "HMR_3164;HMR_3422;HMR_3426" "RCR11351;RCR12667;RCR12671" "" 0 "" "RHEA:26558" "HMR_3164;FAOXC4C2m;MAR05449;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03166" "R01975" "HACD1m;FAOXC4020m;FAOXC80;HMR_3426" "R01975M" "r0460" "" "HACD1m;FAOXC4C2m;FAOXC80;HMR_3422;HMR_3426" "MNXR100541" "HMR_3166;HMR_3422;HMR_3426" "RCR11352;RCR12667;RCR12671" "" 0 "" "RHEA:30799" "HMR_3166;FAOXC4C2m;MAR05449;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03885" "R00238" "ACACT1m;FAOXC4020m;FAOXC80;HMR_3426" "R00238M" "r0070" "" "ACACT1rm;FAOXC4C2m;FAOXC80;HMR_3422;HMR_3426" "MNXR95194" "HMR_3885;HMR_3422;HMR_3426" "RCR10247;RCR12667;RCR12671" "" 0 "RHEA:21039" "RHEA:21036" "HMR_3885;FAOXC4C2m;MAR05449;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR04250" "R04293" "QUILSYN" "" "r0675" "" "QUILSYN" "MNXR103396" "HMR_4250" "RCR11353" "" 1 "" "RHEA:25147" "HMR_4250"
"MAR08091" "" "3HXKYNDCL" "" "" "" "3HXKYNDCL" "MNXR94906" "HMR_8091" "RCR11354" "" 0 "" "" "HMR_8091"
"MAR08092" "R04907" "3HXKYNOXDA" "" "" "" "3HXKYNOXDA" "MNXR94907" "HMR_8092" "RCR11355" "" 0 "" "" "HMR_8092"
Expand Down Expand Up @@ -2647,14 +2647,14 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03143" "R04744" "" "R04744X" "r0728" "" "r0728;HMR_3422" "MNXR97889" "HMR_3143;HMR_3422" "RCR12646;RCR12667" "" 0 "" "RHEA:31191" "HMR_3143;HMR_3422;MAR03422"
"MAR03144" "R04743" "" "R04743X" "r0726" "" "r0726;HMR_3422" "MNXR100545" "HMR_3144;HMR_3422" "RCR12647;RCR12667" "" 0 "" "RHEA:31187" "HMR_3144;HMR_3422;MAR03422"
"MAR03146" "R03778" "" "R03778X" "r0634" "" "r0634;HMR_3422" "MNXR95198" "HMR_3146;HMR_3422" "RCR12648;RCR12667" "" 0 "RHEA:31089" "RHEA:31087" "HMR_3146;HMR_3422;MAR03422"
"MAR03149" "R03777" "r1448" "" "" "R-HSA-77338" "HMR_3149;r1448;HMR_3422" "MNXR95304" "HMR_3149;HMR_3422" "RCR12649;RCR12667" "" 0 "" "RHEA:30943" "HMR_3149;r1448;MAR02369;HMR_3422;MAR03422"
"MAR03150" "R04746" "" "R04746M" "r0731" "" "r0731;HMR_3422" "MNXR97888" "HMR_3150;HMR_3422" "RCR12650;RCR12667" "" 0 "" "RHEA:31199" "HMR_3150;HMR_3422;MAR03422"
"MAR03151" "R04745" "" "R04745M" "r0730" "" "r0730;HMR_3422" "MNXR100544" "HMR_3151;HMR_3422" "RCR12651;RCR12667" "" 0 "" "RHEA:31195" "HMR_3151;HMR_3422;MAR03422"
"MAR03153" "R04747" "" "R04747M" "r0732" "" "r0732;HMR_3422" "MNXR109092" "HMR_3153;HMR_3422" "RCR12652;RCR12667" "" 0 "RHEA:31205" "RHEA:31203" "HMR_3153;HMR_3422;MAR03422"
"MAR03156" "R04751" "r1450" "" "" "R-HSA-77327" "HMR_3156;r1450;HMR_3422" "MNXR109093" "HMR_3156;HMR_3422" "RCR12653;RCR12667" "" 0 "" "RHEA:31207" "HMR_3156;r1450;MAR02372;HMR_3422;MAR03422"
"MAR03157" "R04749" "HMR_3426" "R04749M" "r0734" "" "r0734;HMR_3422;HMR_3426" "MNXR97886" "HMR_3157;HMR_3422;HMR_3426" "RCR12654;RCR12667;RCR12671" "" 0 "" "RHEA:30547" "HMR_3157;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03158" "R04748" "HMR_3426" "R04748M" "r0733" "R-HSA-77323" "r0733;HMR_3422;HMR_3426" "MNXR100543" "HMR_3158;HMR_3422;HMR_3426" "RCR12655;RCR12667;RCR12671" "" 0 "" "RHEA:31143" "HMR_3158;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03160" "R01177" "HMR_3426" "R01177M" "r0287" "R-HSA-77321" "r0287;HMR_3422;HMR_3426" "MNXR95196" "HMR_3160;HMR_3422;HMR_3426" "RCR12656;RCR12667;RCR12671" "" 0 "" "RHEA:31111" "HMR_3160;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03149" "R03777" "r1448;FAOXC8C6m;FAOXC80" "" "" "R-HSA-77338" "HMR_3149;r1448;FAOXC6C8m;FAOXC80;HMR_3422" "MNXR95304" "HMR_3149;HMR_3422" "RCR12649;RCR12667" "" 0 "" "RHEA:30943" "HMR_3149;r1448;MAR02369;FAOXC8C6m;MAR06329;FAOXC80;MAR01009;HMR_3422;MAR03422"
"MAR03150" "R04746" "FAOXC8C6m;FAOXC80" "R04746M" "r0731" "" "r0731;FAOXC8C6m;FAOXC80;HMR_3422" "MNXR97888" "HMR_3150;HMR_3422" "RCR12650;RCR12667" "" 0 "" "RHEA:31199" "HMR_3150;FAOXC6C8m;MAR06329;FAOXC80;MAR01009;HMR_3422;MAR03422"
"MAR03151" "R04745" "FAOXC8C6m;FAOXC80" "R04745M" "r0730" "" "r0730;FAOXC8C6m;FAOXC80;HMR_3422" "MNXR100544" "HMR_3151;HMR_3422" "RCR12651;RCR12667" "" 0 "" "RHEA:31195" "HMR_3151;FAOXC8C6m;MAR06329;FAOXC80;MAR01009;HMR_3422;MAR03422"
"MAR03153" "R04747" "FAOXC8C6m;FAOXC80" "R04747M" "r0732" "" "r0732;FAOXC8C6m;FAOXC80;HMR_3422" "MNXR109092" "HMR_3153;HMR_3422" "RCR12652;RCR12667" "" 0 "RHEA:31205" "RHEA:31203" "HMR_3153;FAOXC8C6m;MAR06329;FAOXC80;MAR01009;HMR_3422;MAR03422"
"MAR03156" "R04751" "r1450;FAOXC6C4m;FAOXC80" "" "" "R-HSA-77327" "HMR_3156;r1450;FAOXC6C4m;FAOXC80;HMR_3422" "MNXR109093" "HMR_3156;HMR_3422" "RCR12653;RCR12667" "" 0 "" "RHEA:31207" "HMR_3156;r1450;MAR02372;FAOXC6C4m;MAR06283;FAOXC80;MAR01009;HMR_3422;MAR03422"
"MAR03157" "R04749" "FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3426" "R04749M" "r0734" "" "r0734;FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3422;HMR_3426" "MNXR97886" "HMR_3157;HMR_3422;HMR_3426" "RCR12654;RCR12667;RCR12671" "" 0 "" "RHEA:30547" "HMR_3157;FAOXC6C4m;MAR06283;FAOXC61C4m;MAR06279;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03158" "R04748" "FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3426" "R04748M" "r0733" "R-HSA-77323" "r0733;FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3422;HMR_3426" "MNXR100543" "HMR_3158;HMR_3422;HMR_3426" "RCR12655;RCR12667;RCR12671" "" 0 "" "RHEA:31143" "HMR_3158;FAOXC6C4m;MAR06283;FAOXC61C4m;MAR06279;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03160" "R01177" "FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3426" "R01177M" "r0287" "R-HSA-77321" "r0287;FAOXC6C4m;FAOXC61C4m;FAOXC80;HMR_3422;HMR_3426" "MNXR95196" "HMR_3160;HMR_3422;HMR_3426" "RCR12656;RCR12667;RCR12671" "" 0 "" "RHEA:31111" "HMR_3160;FAOXC6C4m;MAR06283;FAOXC61C4m;MAR06279;FAOXC80;MAR01009;HMR_3422;MAR03422;HMR_3426;MAR03426"
"MAR03398" "" "HMR_3398" "" "" "" "HMR_3398" "" "HMR_3398" "RCR12657" "" 0 "" "" "HMR_3398"
"MAR03406" "" "HMR_3406" "" "" "" "HMR_3406" "" "HMR_3406" "RCR12658" "" 0 "" "" "HMR_3406"
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the last column of this row should be changed from ""HMR_3160;FAOXC6C4m;MAR03160;FAOXC61C4m;MAR06279;FAOXC80;MAR01009"" to ""HMR_3160;FAOXC6C4m;MAR06283;FAOXC61C4m;MAR06279;FAOXC80;MAR01009""

"MAR03407" "" "" "" "" "" "HMR_3407" "" "HMR_3407" "RCR12659" "" 0 "" "" "HMR_3407"
Expand Down Expand Up @@ -8286,7 +8286,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR00982" "" "FAOXC2452256x" "" "" "" "FAOXC2452256x" "MNXR99365" "" "" "" 0 "" "" "FAOXC2452256x"
"MAR01001" "" "FAOXC246226x" "" "" "" "FAOXC246226x" "MNXR99366" "" "" "" 0 "" "" "FAOXC246226x"
"MAR01005" "" "FAOXC260240x" "" "" "" "FAOXC260240x" "MNXR99367" "" "" "" 0 "" "" "FAOXC260240x"
"MAR01009" "" "FAOXC80" "" "" "" "FAOXC80" "MNXR99373" "" "" "" 0 "" "" "FAOXC80"
"MAR01012" "" "FAS100COA" "" "" "" "FAS100COA" "MNXR99385" "" "" "" 0 "" "" "FAS100COA"
"MAR01019" "" "FAS120COA" "" "" "" "FAS120COA" "MNXR99389" "" "" "" 0 "" "" "FAS120COA"
"MAR01024" "" "FAS140COA" "" "" "" "FAS140COA" "MNXR99393" "" "" "" 0 "" "" "FAS140COA"
Expand Down Expand Up @@ -9340,23 +9339,19 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR05427" "" "FAOXC22OHC22r" "" "" "" "FAOXC22OHC22r" "" "" "" "" 0 "" "" "FAOXC22OHC22r"
"MAR05428" "" "FAOXC241C221x" "" "" "" "FAOXC241C221x" "" "" "" "" 0 "" "" "FAOXC241C221x"
"MAR05431" "" "FAOXC24C22x" "" "" "" "FAOXC24C22x" "" "" "" "" 0 "" "" "FAOXC24C22x"
"MAR05449" "" "FAOXC4020m" "" "" "" "FAOXC4C2m" "MNXR99368" "" "" "" 0 "" "" "FAOXC4C2m"
"MAR05456" "" "FAOXC4C4DCc" "" "" "" "FAOXC4C4DCc" "" "" "" "" 0 "" "" "FAOXC4C4DCc"
"MAR05988" "" "FAOXC5C3x" "" "" "" "FAOXC5C3x" "" "" "" "" 0 "" "" "FAOXC5C3x"
"MAR05991" "" "FAOXC5C5DCc" "" "" "" "FAOXC5C5DCc" "" "" "" "" 0 "" "" "FAOXC5C5DCc"
"MAR05999" "" "FAOXC5C5OHm" "" "" "" "FAOXC5C5OHm" "" "" "" "" 0 "RHEA:31081" "RHEA:31079" "FAOXC5C5OHm"
"MAR06278" "" "FAOXC5OHc" "" "" "" "FAOXC5OHc" "" "" "" "" 0 "" "" "FAOXC5OHc"
"MAR06279" "" "FAOXC61C4m" "" "" "" "FAOXC61C4m" "" "" "" "" 0 "" "" "FAOXC61C4m"
"MAR06280" "" "FAOXC61C4x" "" "" "" "FAOXC61C4x" "" "" "" "" 0 "" "" "FAOXC61C4x"
"MAR06281" "" "FAOXC61m;HMR_3426" "" "" "" "FAOXC61m;HMR_3426" "" "HMR_3426" "RCR12671" "" 0 "" "" "FAOXC61m;HMR_3426;MAR03426"
"MAR06282" "" "FAOXC61x" "" "" "" "FAOXC61x" "" "" "" "" 0 "" "" "FAOXC61x"
"MAR06283" "" "FAOXC6C4m" "" "" "" "FAOXC6C4m" "" "" "" "" 0 "" "" "FAOXC6C4m"
"MAR06284" "" "FAOXC6C4x" "" "" "" "FAOXC6C4x" "" "" "" "" 0 "" "" "FAOXC6C4x"
"MAR06285" "" "FAOXC6DCC4DCx" "" "" "" "FAOXC6DCC4DCx" "" "" "" "" 0 "" "" "FAOXC6DCC4DCx"
"MAR06319" "" "FAOXC7C5m" "" "" "" "FAOXC7C5m" "" "" "" "" 0 "" "" "FAOXC7C5m"
"MAR06320" "" "FAOXC81C61m;HMR_3426" "" "" "" "FAOXC81C61m;HMR_3426" "" "HMR_3426" "RCR12671" "" 0 "" "" "FAOXC81C61m;HMR_3426;MAR03426"
"MAR06322" "" "FAOXC81C61x" "" "" "" "FAOXC81C61x" "" "" "" "" 0 "" "" "FAOXC81C61x"
"MAR06329" "" "FAOXC8C6m" "" "" "" "FAOXC8C6m" "" "" "" "" 0 "" "" "FAOXC8C6m"
"MAR06344" "" "FAOXC8C6x" "" "" "" "FAOXC8C6x" "" "" "" "" 0 "" "" "FAOXC8C6x"
"MAR06345" "" "FAOXC8DCC6DCx" "" "" "" "FAOXC8DCC6DCx" "" "" "" "" 0 "" "" "FAOXC8DCC6DCx"
"MAR06346" "" "" "" "" "" "FAOXC9BRC7BRm" "" "" "" "" 0 "" "" "FAOXC9BRC7BRm"
Expand Down