feat: add compartment information to genes.tsv

[haowang-bioinfo]

Main improvements in this PR:

• compartment information is added as discussed in tabulate sub-cellular localizations for metabolic enzymes #436
  • subcellular locations of metabolic genes were extracted from experimentally validated Cell Atlas and manually curated SwissProt data sources
  • compartment info from both sources were combined and integrated into genes.tsv with two columns: compartments and compDataSource

I hereby confirm that I have:

• Tested my code on my own computer for running the model
• Selected develop as a target branch

[feiranl]

I will add the predicted compartment soon to this file.

[haowang-bioinfo]

I will add the predicted compartment soon to this file.

maybe better to add prediction in another PR after this

[mihai-sysbio]

Having the localization source as a separate column in this file can get tricky. For example, when there are 3 localizations and 2 sources:

genes	compartments	compDataSource
ENSG00000003987	Golgi apparatus;Cytosol;Nucleus	SwissProt&CellAtlas

This might mean agreement between sources, or it might mean that it is a "sum". To avoid this source of confusion, I suggest the removal of this column from genes.tsv. If the exact source is needed, one should look directly into the data files.

[feiranl]

👍