ENH: ElastixRegistrationMethod writes initial transform parameter files #909
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Let ElastixRegistrationMethod write the transform maps from its InitialTransformParameterObject to the output directory.
N-Dekker
commented
Jun 14, 2023
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| argumentMap["-tp"] = initialTransformParameterFileName; |
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It appears sufficient to place the name of the last initial transform parameter file (for example, "InitialTransformParameters.2.txt") in the command-line argument map, entry "-tp". This is picked up by TransformBase<TElastix>::ReadFromFile() at
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For the sake of time, I'll merge this this afternoon, but you may still have a look afterwards, of course. FYI, I did locally test that the sequence of transformations that is written this way can be read back in by transformix 👍 |
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Jul 19, 2023
Follow-up to InsightSoftwareConsortium#211 commit 1043f10 "ENH: Bump elastix version to 2023-05-15, use C++17" Including: SuperElastix/elastix#936 SuperElastix/elastix@115d8e1 ENH: Add `ElastixRegistrationMethod::SetInitialTransform SuperElastix/elastix#933 SuperElastix/elastix@d33a0d5 BUG: Fix reference count in ConvertItkTransformBaseToSingleItkTransform SuperElastix/elastix#924 SuperElastix/elastix@71a4a9a ENH: Add TransformParameterFileName property to TransformixFilter SuperElastix/elastix#922 SuperElastix/elastix@9d76b86 ENH: Restore ELASTIX_BUILD_EXECUTABLE CMake option SuperElastix/elastix#909 SuperElastix/elastix@9e64269 ENH: ElastixRegistrationMethod writes initial transform parameter files SuperElastix/elastix#903 SuperElastix/elastix@2170592 ENH: Remove the letter 's' from "InitialTransformParametersFileName" SuperElastix/elastix#898 SuperElastix/elastix@691c358 BUG: Add InitialTransformParameterObject maps to registration result
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Jul 20, 2023
Follow-up to InsightSoftwareConsortium#211 commit 1043f10 "ENH: Bump elastix version to 2023-05-15, use C++17" Including: SuperElastix/elastix#936 SuperElastix/elastix@115d8e1 ENH: Add `ElastixRegistrationMethod::SetInitialTransform SuperElastix/elastix#933 SuperElastix/elastix@d33a0d5 BUG: Fix reference count in ConvertItkTransformBaseToSingleItkTransform SuperElastix/elastix#924 SuperElastix/elastix@71a4a9a ENH: Add TransformParameterFileName property to TransformixFilter SuperElastix/elastix#922 SuperElastix/elastix@9d76b86 ENH: Restore ELASTIX_BUILD_EXECUTABLE CMake option SuperElastix/elastix#909 SuperElastix/elastix@9e64269 ENH: ElastixRegistrationMethod writes initial transform parameter files SuperElastix/elastix#903 SuperElastix/elastix@2170592 ENH: Remove the letter 's' from "InitialTransformParametersFileName" SuperElastix/elastix#898 SuperElastix/elastix@691c358 BUG: Add InitialTransformParameterObject maps to registration result
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Jul 25, 2023
Follow-up to InsightSoftwareConsortium#211 commit 1043f10 "ENH: Bump elastix version to 2023-05-15, use C++17" Including: SuperElastix/elastix#936 SuperElastix/elastix@115d8e1 ENH: Add `ElastixRegistrationMethod::SetInitialTransform SuperElastix/elastix#933 SuperElastix/elastix@d33a0d5 BUG: Fix reference count in ConvertItkTransformBaseToSingleItkTransform SuperElastix/elastix#924 SuperElastix/elastix@71a4a9a ENH: Add TransformParameterFileName property to TransformixFilter SuperElastix/elastix#922 SuperElastix/elastix@9d76b86 ENH: Restore ELASTIX_BUILD_EXECUTABLE CMake option SuperElastix/elastix#909 SuperElastix/elastix@9e64269 ENH: ElastixRegistrationMethod writes initial transform parameter files SuperElastix/elastix#903 SuperElastix/elastix@2170592 ENH: Remove the letter 's' from "InitialTransformParametersFileName" SuperElastix/elastix#898 SuperElastix/elastix@691c358 BUG: Add InitialTransformParameterObject maps to registration result
N-Dekker
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Jul 25, 2023
Follow-up to #211 commit 1043f10 "ENH: Bump elastix version to 2023-05-15, use C++17" Including: SuperElastix/elastix#936 SuperElastix/elastix@115d8e1 ENH: Add `ElastixRegistrationMethod::SetInitialTransform SuperElastix/elastix#933 SuperElastix/elastix@d33a0d5 BUG: Fix reference count in ConvertItkTransformBaseToSingleItkTransform SuperElastix/elastix#924 SuperElastix/elastix@71a4a9a ENH: Add TransformParameterFileName property to TransformixFilter SuperElastix/elastix#922 SuperElastix/elastix@9d76b86 ENH: Restore ELASTIX_BUILD_EXECUTABLE CMake option SuperElastix/elastix#909 SuperElastix/elastix@9e64269 ENH: ElastixRegistrationMethod writes initial transform parameter files SuperElastix/elastix#903 SuperElastix/elastix@2170592 ENH: Remove the letter 's' from "InitialTransformParametersFileName" SuperElastix/elastix#898 SuperElastix/elastix@691c358 BUG: Add InitialTransformParameterObject maps to registration result
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Let ElastixRegistrationMethod write the transform maps from its InitialTransformParameterObject to the output directory.