Need missing mask_table files added to OM4_025/INPUT #14
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I removed these non-existing mask_table files fro the xmls. |
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I mishandled this issue. I should indeed add those mask_tables to the ice_ocean_SIS/OM4_025/INPUT. |
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:-) Dr Alistair Adcroft ([email protected]) On Mon, Jan 26, 2015 at 12:29 PM, Niki Zadeh [email protected]
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OK. I added the missing mask_table files and pushed to dev/master. |
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Bugfix: uo,vo diagnostics were registered on B grid
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Aug 17, 2017
- NOAA-GFDL/MOM6@ae22a0f Merge pull request #578 from NCAR/dev/ncar - NOAA-GFDL/MOM6@f4f882f Merge pull request #23 from gustavo-marques/combine_mct_modules - NOAA-GFDL/MOM6@a85b728 Merge MCT modules - NOAA-GFDL/MOM6@ba5b5ba Merge pull request #22 from gustavo-marques/check_fluxes - NOAA-GFDL/MOM6@f5a8483 Adds option to write restart files - NOAA-GFDL/MOM6@8745b4b Fills additional IOB fluxes - NOAA-GFDL/MOM6@f6b22ff Merge branch 'dev/ncar' into check_fluxes - NOAA-GFDL/MOM6@369d5d6 Merge pull request #21 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@2582e0a Adds run paramaters to control SW decomposition - NOAA-GFDL/MOM6@58f78b9 Fill IOB, some fluxes still need to be checked - NOAA-GFDL/MOM6@06a30ab Fixed clock and timing - NOAA-GFDL/MOM6@1bca79b Merge pull request #20 from gustavo-marques/fix_merge - NOAA-GFDL/MOM6@fb89b08 Adds code that got lost during merge - NOAA-GFDL/MOM6@7480492 Merge pull request #19 from gustavo-marques/new_merge - NOAA-GFDL/MOM6@be1e6cf Merge branch 'dev/master' into dev/ncar - NOAA-GFDL/MOM6@76565cb Merge pull request #17 from gustavo-marques/fix_ssh_slopes - NOAA-GFDL/MOM6@c04f081 Fix ssh slope calculation - NOAA-GFDL/MOM6@17d4586 Merge pull request #16 from adcroft/ncar-cherry-picked-fixes - NOAA-GFDL/MOM6@be46fee (*)Fixes gprime(1) when no layer coordinates are set - NOAA-GFDL/MOM6@fccb7ae Avoids a SEGV when OBC are not in use with bi-harmonic friction - NOAA-GFDL/MOM6@f42c970 Merge pull request #15 from gustavo-marques/small_fixes - NOAA-GFDL/MOM6@31787c2 Adds reference to set_time that was lost during a conflict handling - NOAA-GFDL/MOM6@d77936e Fix intent(inout) in ice_ocean_boundary - NOAA-GFDL/MOM6@b403edd Merge pull request #14 from gustavo-marques/docs - NOAA-GFDL/MOM6@4d346ca Merge branch 'dev/ncar' into docs - NOAA-GFDL/MOM6@f7c26a5 Clean the module and start doxygenizing it - NOAA-GFDL/MOM6@cd58e2a Merge pull request #13 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@37a53bc reorganize file structure - NOAA-GFDL/MOM6@e6c5ddd Merge pull request #12 from gustavo-marques/fill_ice_ocean_bnd - NOAA-GFDL/MOM6@6b6289a Remove trailing whitespace - NOAA-GFDL/MOM6@7ce40e5 Fix undefined reference to fill_ice_ocean_bnd - NOAA-GFDL/MOM6@d517719 Merge branch 'dev/ncar' into fill_ice_ocean_bnd - NOAA-GFDL/MOM6@b69ab33 Filling ice_ocean_bnd - Draft - NOAA-GFDL/MOM6@a306c90 Merge pull request #11 from adcroft/use-ocn-public-for-surface - NOAA-GFDL/MOM6@c83e238 Correct indexing when using ocean_public_type - NOAA-GFDL/MOM6@1f39c84 Replaces use of "surface" with "ocean_public_type" - NOAA-GFDL/MOM6@5cd8d7a Filling ice_ocean_bnd, still needs work - NOAA-GFDL/MOM6@3ceef26 Merge pull request #10 from adcroft/sketch-out-mct-run - NOAA-GFDL/MOM6@714e8d6 Adds placeholders for stepping foward MOM - NOAA-GFDL/MOM6@7f2207c Merge pull request #7 from adcroft/fix-mct-whitespace - NOAA-GFDL/MOM6@a1db77f Cleans up white space - NOAA-GFDL/MOM6@5700d67 Merge pull request #6 from adcroft/add-use-only-for-imports - NOAA-GFDL/MOM6@beac3ed Adds "only" for all use statements - NOAA-GFDL/MOM6@231d19e Merge pull request #5 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@3a923a2 Got initialization working - NOAA-GFDL/MOM6@8b38141 Wrapped global data - NOAA-GFDL/MOM6@970f848 added debugging - NOAA-GFDL/MOM6@2540ed8 Filled empty subroutines in ocn_comp_mct.F90 - NOAA-GFDL/MOM6@ed3ed30 Added ocn_import_export module - NOAA-GFDL/MOM6@aba7dc2 Completed ocn_init_mct - NOAA-GFDL/MOM6@5df3bc3 Added method to point ponters to members of ocean_state_type - NOAA-GFDL/MOM6@57e6086 Added methods to return domain/grid shape - NOAA-GFDL/MOM6@37e7356 Added ocn_import_export.F90 - NOAA-GFDL/MOM6@2b794da Merge pull request #4 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@fbd405b Added coupler indices module - NOAA-GFDL/MOM6@fa86163 Merge pull request #3 from NCAR/dev/gfdl - NOAA-GFDL/MOM6@e8f2999 Merge pull request #2 from gustavo-marques/temp_salt_z_init_file - NOAA-GFDL/MOM6@86936ba Adds option to read initial temp and salt from separate files - NOAA-GFDL/MOM6@54f7976 Most initialization working - NOAA-GFDL/MOM6@426357c Time and calendar initialization in ocn_comp_mct.F90 - NOAA-GFDL/MOM6@346097d Moved blank ocn_comp_mct.F90 - NOAA-GFDL/MOM6@405fecb Merge pull request #1 from gustavo-marques/ice_shelf - NOAA-GFDL/MOM6@711a613 Removes frazil's contribution to evaporation
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Aug 17, 2017
- Updates MOM_parameter_doc files. - NOAA-GFDL/MOM6@cde6d3f Merge branch 'dev/master' into dev/gfdl - NOAA-GFDL/MOM6@ae22a0f Merge pull request #578 from NCAR/dev/ncar - NOAA-GFDL/MOM6@f4f882f Merge pull request #23 from gustavo-marques/combine_mct_modules - NOAA-GFDL/MOM6@a85b728 Merge MCT modules - NOAA-GFDL/MOM6@ba5b5ba Merge pull request #22 from gustavo-marques/check_fluxes - NOAA-GFDL/MOM6@f5a8483 Adds option to write restart files - NOAA-GFDL/MOM6@8745b4b Fills additional IOB fluxes - NOAA-GFDL/MOM6@f6b22ff Merge branch 'dev/ncar' into check_fluxes - NOAA-GFDL/MOM6@369d5d6 Merge pull request #21 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@2582e0a Adds run paramaters to control SW decomposition - NOAA-GFDL/MOM6@58f78b9 Fill IOB, some fluxes still need to be checked - NOAA-GFDL/MOM6@06a30ab Fixed clock and timing - NOAA-GFDL/MOM6@1bca79b Merge pull request #20 from gustavo-marques/fix_merge - NOAA-GFDL/MOM6@fb89b08 Adds code that got lost during merge - NOAA-GFDL/MOM6@7480492 Merge pull request #19 from gustavo-marques/new_merge - NOAA-GFDL/MOM6@be1e6cf Merge branch 'dev/master' into dev/ncar - NOAA-GFDL/MOM6@76565cb Merge pull request #17 from gustavo-marques/fix_ssh_slopes - NOAA-GFDL/MOM6@c04f081 Fix ssh slope calculation - NOAA-GFDL/MOM6@17d4586 Merge pull request #16 from adcroft/ncar-cherry-picked-fixes - NOAA-GFDL/MOM6@be46fee (*)Fixes gprime(1) when no layer coordinates are set - NOAA-GFDL/MOM6@fccb7ae Avoids a SEGV when OBC are not in use with bi-harmonic friction - NOAA-GFDL/MOM6@f42c970 Merge pull request #15 from gustavo-marques/small_fixes - NOAA-GFDL/MOM6@31787c2 Adds reference to set_time that was lost during a conflict handling - NOAA-GFDL/MOM6@d77936e Fix intent(inout) in ice_ocean_boundary - NOAA-GFDL/MOM6@b403edd Merge pull request #14 from gustavo-marques/docs - NOAA-GFDL/MOM6@4d346ca Merge branch 'dev/ncar' into docs - NOAA-GFDL/MOM6@f7c26a5 Clean the module and start doxygenizing it - NOAA-GFDL/MOM6@cd58e2a Merge pull request #13 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@37a53bc reorganize file structure - NOAA-GFDL/MOM6@e6c5ddd Merge pull request #12 from gustavo-marques/fill_ice_ocean_bnd - NOAA-GFDL/MOM6@6b6289a Remove trailing whitespace - NOAA-GFDL/MOM6@7ce40e5 Fix undefined reference to fill_ice_ocean_bnd - NOAA-GFDL/MOM6@d517719 Merge branch 'dev/ncar' into fill_ice_ocean_bnd - NOAA-GFDL/MOM6@b69ab33 Filling ice_ocean_bnd - Draft - NOAA-GFDL/MOM6@a306c90 Merge pull request #11 from adcroft/use-ocn-public-for-surface - NOAA-GFDL/MOM6@c83e238 Correct indexing when using ocean_public_type - NOAA-GFDL/MOM6@1f39c84 Replaces use of "surface" with "ocean_public_type" - NOAA-GFDL/MOM6@5cd8d7a Filling ice_ocean_bnd, still needs work - NOAA-GFDL/MOM6@3ceef26 Merge pull request #10 from adcroft/sketch-out-mct-run - NOAA-GFDL/MOM6@714e8d6 Adds placeholders for stepping foward MOM - NOAA-GFDL/MOM6@7f2207c Merge pull request #7 from adcroft/fix-mct-whitespace - NOAA-GFDL/MOM6@a1db77f Cleans up white space - NOAA-GFDL/MOM6@5700d67 Merge pull request #6 from adcroft/add-use-only-for-imports - NOAA-GFDL/MOM6@beac3ed Adds "only" for all use statements - NOAA-GFDL/MOM6@231d19e Merge pull request #5 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@3a923a2 Got initialization working - NOAA-GFDL/MOM6@8b38141 Wrapped global data - NOAA-GFDL/MOM6@970f848 added debugging - NOAA-GFDL/MOM6@2540ed8 Filled empty subroutines in ocn_comp_mct.F90 - NOAA-GFDL/MOM6@ed3ed30 Added ocn_import_export module - NOAA-GFDL/MOM6@aba7dc2 Completed ocn_init_mct - NOAA-GFDL/MOM6@5df3bc3 Added method to point ponters to members of ocean_state_type - NOAA-GFDL/MOM6@57e6086 Added methods to return domain/grid shape - NOAA-GFDL/MOM6@37e7356 Added ocn_import_export.F90 - NOAA-GFDL/MOM6@2b794da Merge pull request #4 from alperaltuntas/dev/ncar - NOAA-GFDL/MOM6@fbd405b Added coupler indices module - NOAA-GFDL/MOM6@fa86163 Merge pull request #3 from NCAR/dev/gfdl - NOAA-GFDL/MOM6@e8f2999 Merge pull request #2 from gustavo-marques/temp_salt_z_init_file - NOAA-GFDL/MOM6@86936ba Adds option to read initial temp and salt from separate files - NOAA-GFDL/MOM6@54f7976 Most initialization working - NOAA-GFDL/MOM6@426357c Time and calendar initialization in ocn_comp_mct.F90 - NOAA-GFDL/MOM6@346097d Moved blank ocn_comp_mct.F90 - NOAA-GFDL/MOM6@405fecb Merge pull request #1 from gustavo-marques/ice_shelf - NOAA-GFDL/MOM6@711a613 Removes frazil's contribution to evaporation
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Jan 20, 2021
- NOAA-GFDL/MOM6@fe5e60589 Merge branch 'jiandewang-main-candidate-EMC-2021-01-04' into main - NOAA-GFDL/MOM6@ea5e2458f Fixed white space and line length - NOAA-GFDL/MOM6@c05b042d9 Added API documentation for chkerr() - NOAA-GFDL/MOM6@172025dd8 add documentation for function ChkErr - NOAA-GFDL/MOM6@633dc9241 add documentation for mom_cap_methods remove duplicated declearation of function chkerr, change case to match - NOAA-GFDL/MOM6@5f5871c1d Addressing reviewers comments: * document wave coupling variables * switch ii jj loops for computational efficiency * clarify error message * fix indexing and style - NOAA-GFDL/MOM6@971802a7d revert back to GFDL main for coupled_driver codes - NOAA-GFDL/MOM6@d50251632 minor enhancement in MOM_wave_interface.F90 to aviod undocumented error - NOAA-GFDL/MOM6@593aecb3b Merge pull request NOAA-GFDL#45 from jiandewang/feature/update-to-GFDL-20201215 - NOAA-GFDL/MOM6@5d0f8b481 Merge commit '0f664aa82f3034252c334dad1e4129f2fee112e3' into feature/update-to-GFDL-20201215 this is corresponding to GFDL main branch commit 20201218 (hash # 0f664aa) - NOAA-GFDL/MOM6@18bf38869 Merge pull request NOAA-GFDL#43 from NOAA-EMC/bugfix/mom6solo-ufs - NOAA-GFDL/MOM6@2c150d951 bugfix: make the last argument in subroutine Update_Surface_Waves to be optional in src/user/MOM_wave_interface.F90. This is a bug from PR NOAA-GFDL#23 bbdef39. - NOAA-GFDL/MOM6@966d60800 Merge pull request NOAA-GFDL#40 from jiandewang/feature/update-to-GFDL-20201022 - NOAA-GFDL/MOM6@aff9c2c60 Merge commit 'ced41b5183920e0993f135feda0496a07a65981a' into feature/update-to-GFDL-20201022 this is corresponding to GFDL main 20201022 commit main-candidate-2020-09-18 - NOAA-GFDL/MOM6@7a76a1390 Merge pull request NOAA-GFDL#37 from aerorahul/bugfix/fieldwidth - NOAA-GFDL/MOM6@d13efbe1c fix fieldwidth error with gfortran - NOAA-GFDL/MOM6@3ce81f4c2 Merge pull request NOAA-GFDL#35 from jiandewang/feature/update-to-GFDL-20200811 - NOAA-GFDL/MOM6@fbfa05b91 Merge commit 'eb57e51f5ed2287e593c6de3a1e986735335ca55' into feature/update-to-GFDL-20200811 - NOAA-GFDL/MOM6@eb58a2e23 add ocean lag option, make cap consistent (NOAA-GFDL#33) - NOAA-GFDL/MOM6@7e1188c72 add statediagnose feature (NOAA-GFDL#31) - NOAA-GFDL/MOM6@728c429c3 Merge pull request NOAA-GFDL#29 from jiandewang/feature/update-to-GFDL-20200515-2bug-fix - NOAA-GFDL/MOM6@cbcf3ec9b bug fixing: (1) add missing halo in MOM_full_convection.F90 (2) remove wrong logic "not" in MOM.F90 at line 2669 - NOAA-GFDL/MOM6@4fccd95e9 merge GFDL dev/master May 29, 2020 commit (hash # 48d208d), which refer to dev-master-candidate-2020-05-15 solve conflict in: (1) config_src/coupled_driver/MOM_surface_forcing_gfdl.F90 (2) src/core/MOM_forcing_type.F90 - NOAA-GFDL/MOM6@bbdef39ae Updates for wave coupling in NUOPC (NOAA-GFDL#23) - NOAA-GFDL/MOM6@8d565ccdd nuopc_driver updates (NOAA-GFDL#22) - NOAA-GFDL/MOM6@f8bc91c14 Feature/logcleanup (NOAA-GFDL#20) - NOAA-GFDL/MOM6@6d2a83468 Merge pull request NOAA-GFDL#18 from jiandewang/update-to-GFDL-20200327 - NOAA-GFDL/MOM6@6aec544ea merge GFDL dev/master 20200401 commit (hash # 010492e) solve conflice in mom_surface_forcing_nuopc.F90 - NOAA-GFDL/MOM6@161cbb907 Merge pull request NOAA-GFDL#14 from jiandewang/update-to-GFDL-20200108 - NOAA-GFDL/MOM6@ca73ebb14 Merge remote-tracking branch 'Denise/feature/debugMOM6' into update-to-GFDL-20200108 - NOAA-GFDL/MOM6@8c23ae9ad fix divide by zero in wave_interface which allows for running in debug mode for NEMS (NOAA-GFDL#12) - NOAA-GFDL/MOM6@d86631527 solve conflict in mom_surface_forcing_nuopc.F90 - NOAA-GFDL/MOM6@40871c180 more better way of fixing divide by zero - NOAA-GFDL/MOM6@ae51d44ec fix to wave_interface for debugging; looked safe but gave error about mixed complex and real variables - NOAA-GFDL/MOM6@7951a8436 fix divide by zero
adcroft
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Jan 20, 2021
- NOAA-GFDL/MOM6@55279ccc4 Merge branch 'main' into main-to-gfdl - NOAA-GFDL/MOM6@fe5e60589 Merge branch 'jiandewang-main-candidate-EMC-2021-01-04' into main - NOAA-GFDL/MOM6@ea5e2458f Fixed white space and line length - NOAA-GFDL/MOM6@c05b042d9 Added API documentation for chkerr() - NOAA-GFDL/MOM6@172025dd8 add documentation for function ChkErr - NOAA-GFDL/MOM6@263d355a1 Merge pull request #1291 from MJHarrison-GFDL/oda_use_framework - NOAA-GFDL/MOM6@02c08f68a Merge pull request NOAA-GFDL#12 from Hallberg-NOAA/Harrison_ODA_use_framework - NOAA-GFDL/MOM6@4d839aa44 Merge branch 'oda_use_framework' of https://github.com/MJHarrison-GFDL/MOM6 into Harrison_ODA_use_framework - NOAA-GFDL/MOM6@b90ad5cc6 Merge pull request #1289 from Hallberg-NOAA/revise_framework_more - NOAA-GFDL/MOM6@fcae4b9f9 Merge branch 'dev/gfdl' into revise_framework_more - NOAA-GFDL/MOM6@da8e4cb8b Merge pull request #1292 from adcroft/nuopc-api-test - NOAA-GFDL/MOM6@49c7fddfe Merge branch 'dev/gfdl' into nuopc-api-test - NOAA-GFDL/MOM6@2157311ff Merge branch 'dev/gfdl' into revise_framework_more - NOAA-GFDL/MOM6@be5fb700a Merge pull request #1287 from marshallward/hor_visc_2x - NOAA-GFDL/MOM6@d4fe16e3c Merge branch 'dev/gfdl' into nuopc-api-test - NOAA-GFDL/MOM6@354d6d640 MOM_hor_visc: Revert tension/shear loop fusion - NOAA-GFDL/MOM6@eb0c03a3d Avoid unnecessary steps in actions/testing_setup - NOAA-GFDL/MOM6@e29a12b80 Adds a GH workflow to check driver APIs - NOAA-GFDL/MOM6@776a81510 Merge branch 'dev/gfdl' of github.com:NOAA-GFDL/MOM6 into oda_use_framework - NOAA-GFDL/MOM6@408e3a402 Pass through interface to FMS ensemble manager - NOAA-GFDL/MOM6@18aff413a Replace FMS infrastructure specific calls with equivalent MOM interfaces - NOAA-GFDL/MOM6@bfdbe2115 New interfaces for array redistribution across domains. - NOAA-GFDL/MOM6@b6ce7c742 pass through interfaces for mpp_broadcast_domain and mpp_set_root_pe - NOAA-GFDL/MOM6@6b24190c6 update analysis time after call to oda , consistent with SPEAR configurations - NOAA-GFDL/MOM6@76b3ccce4 Use only for netcdf in MOM_horizontal_regridding - NOAA-GFDL/MOM6@e4d984a7a +Created MOM_diag_manager to wrap diag_manager - NOAA-GFDL/MOM6@7114d63c1 Merge branch 'dev/gfdl' into hor_visc_2x - NOAA-GFDL/MOM6@9dabf3f52 Merge branch 'dev/gfdl' into revise_framework_more - NOAA-GFDL/MOM6@76cb4718d Cleaned up MOM_horizontal_regridding - NOAA-GFDL/MOM6@0bd16f4ab Merge pull request #1283 from Hallberg-NOAA/revise_framework - NOAA-GFDL/MOM6@f7beef432 Merge branch 'dev/gfdl' into revise_framework - NOAA-GFDL/MOM6@91b6a15c7 Merge pull request #1288 from adcroft/stream-log-on-fail - NOAA-GFDL/MOM6@43ae9ae7d Adds --with-driver option to configure - NOAA-GFDL/MOM6@a0eb0b69b Always stream job logs in gitlab pipeline - NOAA-GFDL/MOM6@d610712fe Merge branch 'revise_framework' into revise_framework_more - NOAA-GFDL/MOM6@77d0cbe9c Corrected a bug using IO_LAYOUT in place of LAYOUT - NOAA-GFDL/MOM6@906bdc484 Merge branch 'revise_framework' into revise_framework_more - NOAA-GFDL/MOM6@a433cac41 Merge branch 'dev/gfdl' into revise_framework - NOAA-GFDL/MOM6@1417dceb4 +Added MOM_interpolate.F90 - NOAA-GFDL/MOM6@873e4bc3a Merge pull request #1282 from Hallberg-NOAA/indent_cleanup - NOAA-GFDL/MOM6@571013dad +Added MOM_coms_wrapper.F90 - NOAA-GFDL/MOM6@5c93def09 MOM_hor_visc: horizontal_viscosity loop reorder - NOAA-GFDL/MOM6@dc7476755 Adds targets check_mom6_api_nuopc, check_mom6_api_coupled - NOAA-GFDL/MOM6@e1ca9a905 Doxygen comments for get_layout_extents arguments - NOAA-GFDL/MOM6@45d29a99c +Added an explicit interface to open_file - NOAA-GFDL/MOM6@51720fb33 +Split MOM_io_wrapper.F90 out from MOM_io.F90 - NOAA-GFDL/MOM6@37ef28bc0 +Add get_domain_components to MOM_domains.F90 - NOAA-GFDL/MOM6@81a6ff8ee +Add explicit interface for field_exists to MOM_io - NOAA-GFDL/MOM6@d8806f48e +Rename rotated_mpp_chksum to rotated_field_chksum - NOAA-GFDL/MOM6@adb8ec46b +Add deallocate_MOM_domain and get_layout_extents - NOAA-GFDL/MOM6@502eb301e (*)Call MOM_write_field in write_ocean_geometry_file - NOAA-GFDL/MOM6@7091a09c1 +Add MOM_write_field - NOAA-GFDL/MOM6@ee7dd32c8 +Add create_MOM_domain and MOM_domain_init.F90 - NOAA-GFDL/MOM6@1480fbee4 Fix non-standard indentation - NOAA-GFDL/MOM6@e68d31a62 Merge pull request #1268 from Hallberg-NOAA/ke_from_GV - NOAA-GFDL/MOM6@633dc9241 add documentation for mom_cap_methods remove duplicated declearation of function chkerr, change case to match - NOAA-GFDL/MOM6@2fd4596c7 Corrected yet another OMP directive - NOAA-GFDL/MOM6@5f5871c1d Addressing reviewers comments: * document wave coupling variables * switch ii jj loops for computational efficiency * clarify error message * fix indexing and style - NOAA-GFDL/MOM6@069760426 Corrected an OMP directive - NOAA-GFDL/MOM6@5c9b5fad7 Corrected the statement setting use_ice_shelf - NOAA-GFDL/MOM6@c14d208bb Merge commit 'a489a13b' into ke_from_GV - NOAA-GFDL/MOM6@7de89471d Merge branch 'dev/gfdl' into ke_from_GV - NOAA-GFDL/MOM6@d819ccf31 Merge pull request #1280 from Hallberg-NOAA/module_use_cleanup - NOAA-GFDL/MOM6@ca5493caa Merge branch 'dev/gfdl' into module_use_cleanup - NOAA-GFDL/MOM6@a489a13bd Merge branch 'dev/gfdl' into ke_from_GV - NOAA-GFDL/MOM6@971802a7d revert back to GFDL main for coupled_driver codes - NOAA-GFDL/MOM6@aea16f730 Use read_field_chksum in MOM_restart - NOAA-GFDL/MOM6@aed5a680b +Add the new routine read_field_chksum to MOM_io - NOAA-GFDL/MOM6@0b019b667 Avoid using memory macros in MOM_random.F90 - NOAA-GFDL/MOM6@611132731 Use MOM_read_data in RGC_initialization - NOAA-GFDL/MOM6@9b0b8db88 Use MOM framework routines in MOM_open_boundary - NOAA-GFDL/MOM6@1e6bdd6a1 Remove unused module use statements - NOAA-GFDL/MOM6@fc6d60835 Merge branch 'dev/gfdl' into ke_from_GV - NOAA-GFDL/MOM6@d50251632 minor enhancement in MOM_wave_interface.F90 to aviod undocumented error - NOAA-GFDL/MOM6@204622f39 Merge branch 'dev/gfdl' into ke_from_GV - NOAA-GFDL/MOM6@593aecb3b Merge pull request NOAA-GFDL#45 from jiandewang/feature/update-to-GFDL-20201215 - NOAA-GFDL/MOM6@5d0f8b481 Merge commit '0f664aa82f3034252c334dad1e4129f2fee112e3' into feature/update-to-GFDL-20201215 this is corresponding to GFDL main branch commit 20201218 (hash # 0f664aa) - NOAA-GFDL/MOM6@6d5999639 Corrected an OMP directive - NOAA-GFDL/MOM6@6096c6c2e Corrected spacing around semicolons between dos - NOAA-GFDL/MOM6@3f7d3cf1e Corrected additional non-standard line indents - NOAA-GFDL/MOM6@126743133 Merge branch 'dev/gfdl' into ke_from_GV - NOAA-GFDL/MOM6@4075e747d Corrected non-standard line indents - NOAA-GFDL/MOM6@9b333433f +Replace SZK_(G) with SZK_(GV) - NOAA-GFDL/MOM6@8d9cecd6a Merge remote-tracking branch 'hallberg/simplify_diabatic' into ke_from_GV - NOAA-GFDL/MOM6@4ab93b69d +Deprecate the use of G%ke, using GV%ke instead - NOAA-GFDL/MOM6@18bf38869 Merge pull request NOAA-GFDL#43 from NOAA-EMC/bugfix/mom6solo-ufs - NOAA-GFDL/MOM6@2c150d951 bugfix: make the last argument in subroutine Update_Surface_Waves to be optional in src/user/MOM_wave_interface.F90. This is a bug from PR NOAA-GFDL#23 bbdef39. - NOAA-GFDL/MOM6@966d60800 Merge pull request NOAA-GFDL#40 from jiandewang/feature/update-to-GFDL-20201022 - NOAA-GFDL/MOM6@aff9c2c60 Merge commit 'ced41b5183920e0993f135feda0496a07a65981a' into feature/update-to-GFDL-20201022 this is corresponding to GFDL main 20201022 commit main-candidate-2020-09-18 - NOAA-GFDL/MOM6@7a76a1390 Merge pull request NOAA-GFDL#37 from aerorahul/bugfix/fieldwidth - NOAA-GFDL/MOM6@d13efbe1c fix fieldwidth error with gfortran - NOAA-GFDL/MOM6@3ce81f4c2 Merge pull request NOAA-GFDL#35 from jiandewang/feature/update-to-GFDL-20200811 - NOAA-GFDL/MOM6@fbfa05b91 Merge commit 'eb57e51f5ed2287e593c6de3a1e986735335ca55' into feature/update-to-GFDL-20200811 - NOAA-GFDL/MOM6@eb58a2e23 add ocean lag option, make cap consistent (NOAA-GFDL#33) - NOAA-GFDL/MOM6@7e1188c72 add statediagnose feature (NOAA-GFDL#31) - NOAA-GFDL/MOM6@728c429c3 Merge pull request NOAA-GFDL#29 from jiandewang/feature/update-to-GFDL-20200515-2bug-fix - NOAA-GFDL/MOM6@cbcf3ec9b bug fixing: (1) add missing halo in MOM_full_convection.F90 (2) remove wrong logic "not" in MOM.F90 at line 2669 - NOAA-GFDL/MOM6@4fccd95e9 merge GFDL dev/master May 29, 2020 commit (hash # 48d208d), which refer to dev-master-candidate-2020-05-15 solve conflict in: (1) config_src/coupled_driver/MOM_surface_forcing_gfdl.F90 (2) src/core/MOM_forcing_type.F90 - NOAA-GFDL/MOM6@bbdef39ae Updates for wave coupling in NUOPC (NOAA-GFDL#23) - NOAA-GFDL/MOM6@8d565ccdd nuopc_driver updates (NOAA-GFDL#22) - NOAA-GFDL/MOM6@f8bc91c14 Feature/logcleanup (NOAA-GFDL#20) - NOAA-GFDL/MOM6@6d2a83468 Merge pull request NOAA-GFDL#18 from jiandewang/update-to-GFDL-20200327 - NOAA-GFDL/MOM6@6aec544ea merge GFDL dev/master 20200401 commit (hash # 010492e) solve conflice in mom_surface_forcing_nuopc.F90 - NOAA-GFDL/MOM6@161cbb907 Merge pull request NOAA-GFDL#14 from jiandewang/update-to-GFDL-20200108 - NOAA-GFDL/MOM6@ca73ebb14 Merge remote-tracking branch 'Denise/feature/debugMOM6' into update-to-GFDL-20200108 - NOAA-GFDL/MOM6@8c23ae9ad fix divide by zero in wave_interface which allows for running in debug mode for NEMS (NOAA-GFDL#12) - NOAA-GFDL/MOM6@d86631527 solve conflict in mom_surface_forcing_nuopc.F90 - NOAA-GFDL/MOM6@40871c180 more better way of fixing divide by zero - NOAA-GFDL/MOM6@ae51d44ec fix to wave_interface for debugging; looked safe but gave error about mixed complex and real variables - NOAA-GFDL/MOM6@7951a8436 fix divide by zero
marshallward
added a commit
that referenced
this issue
Apr 14, 2021
- NOAA-GFDL/MOM6@fc75e0fa4 Merge pull request #1370 from Hallberg-NOAA/F_case_file_output - NOAA-GFDL/MOM6@e8e8abab9 Merge remote-tracking branch 'hallberg/F_case_file_output' into F_case_file_output - NOAA-GFDL/MOM6@96f1d1e89 Use allocatable types in write_ocean_geometry_files - NOAA-GFDL/MOM6@983824a69 Merge branch 'dev/gfdl' into F_case_file_output - NOAA-GFDL/MOM6@5fe51b18e Merge pull request #1369 from Hallberg-NOAA/SIS2_IO_upgrades - NOAA-GFDL/MOM6@0eb47b25a +More consistent treatment of input_filename = 'F' - NOAA-GFDL/MOM6@03b997b88 +Enhanced support for novel axes in MOM_io - NOAA-GFDL/MOM6@7ec08cd9b Merge pull request #1365 from marshallward/corad_vec_v2 - NOAA-GFDL/MOM6@dc66dd8a7 Merge branch 'dev/gfdl' into corad_vec_v2 - NOAA-GFDL/MOM6@c5c74419d Merge pull request #1364 from jkrasting/downsampled_diag_fix - NOAA-GFDL/MOM6@a5fb36503 Merge branch 'dev/gfdl' into downsampled_diag_fix - NOAA-GFDL/MOM6@d485a5123 Merge pull request #1363 from Hallberg-NOAA/SIS2_infra_support - NOAA-GFDL/MOM6@b413f25c5 Merge branch 'SIS2_infra_support' of github.com:Hallberg-NOAA/MOM6 into SIS2_infra_support - NOAA-GFDL/MOM6@358da7cc4 Corrected comments describing CT_copy_data - NOAA-GFDL/MOM6@ad0bc3c41 Merge branch 'dev/gfdl' into SIS2_infra_support - NOAA-GFDL/MOM6@fae570d0a Merge branch 'main' into main_to_gfdl - NOAA-GFDL/MOM6@5f063044c Fixed downsampling summation for more diag types - NOAA-GFDL/MOM6@c549ae9d9 Merge pull request #1358 from NOAA-GFDL/dev-gfdl-main-candidate-2021-03-26 - NOAA-GFDL/MOM6@ad372fdc2 Merge branch 'dev/gfdl' into SIS2_infra_support - NOAA-GFDL/MOM6@d1dc6b5ba Coriolis: Improved coradcalc vectorization - NOAA-GFDL/MOM6@2b6d3e115 Merge pull request #1362 from marshallward/horvisc_diag_to_stack - NOAA-GFDL/MOM6@9792b2346 Fixed downsampling for x:sum y:point z:point diags - NOAA-GFDL/MOM6@665cd9a3b Merge branch 'dev/gfdl' into horvisc_diag_to_stack - NOAA-GFDL/MOM6@b6c7fdb02 change default value of use_mommesh as true - NOAA-GFDL/MOM6@6d4a48390 Merge pull request #1360 from Hallberg-NOAA/fewer_timelevels - NOAA-GFDL/MOM6@3c1cb2efd +Add MOM_domains interfaces needed by SIS2 - NOAA-GFDL/MOM6@cfa59aab1 +Add coupler_types interfaces needed by SIS2 - NOAA-GFDL/MOM6@97f111779 Merge branch 'dev/gfdl' into fewer_timelevels - NOAA-GFDL/MOM6@813fc7975 Merge pull request #1359 from Hallberg-NOAA/FMS2_io_writes - NOAA-GFDL/MOM6@2ffea27be MOM_hor_visc: Variables moved to stack - NOAA-GFDL/MOM6@4fd380747 Merge branch 'dev/gfdl' into FMS2_io_writes - NOAA-GFDL/MOM6@c62d51f9d Remove inappropriate timelevel arguments - NOAA-GFDL/MOM6@13f1e70f5 Merge pull request #1356 from GEOS-ESM/bugfix/sanAkel/output-b-grid-currents - NOAA-GFDL/MOM6@6c2b944e2 Merge branch 'dev/gfdl' into bugfix/sanAkel/output-b-grid-currents - NOAA-GFDL/MOM6@67b03e324 Merge pull request #1353 from Hallberg-NOAA/less_checksums - NOAA-GFDL/MOM6@5669d4360 Merge branch 'dev/gfdl' into less_checksums - NOAA-GFDL/MOM6@b044be8ee Merge branch 'dev/gfdl' into FMS2_io_writes - NOAA-GFDL/MOM6@fe9b2a106 Merge pull request #1352 from Hallberg-NOAA/FMS2_io - NOAA-GFDL/MOM6@f6105cb22 Merge branch 'dev/gfdl' into FMS2_io - NOAA-GFDL/MOM6@95ad9372b Fix distributed reads of checksums using FMS2_io - NOAA-GFDL/MOM6@81c48cbf6 Merge pull request #5 from marshallward/FMS2_io_writes - NOAA-GFDL/MOM6@ba643bde2 Explicit domain decomposition of horizontal axes - NOAA-GFDL/MOM6@7bdecbc62 Add missing ".nc" to FMS2 output filenames - NOAA-GFDL/MOM6@fad7e0d4a Merge branch 'dev/gfdl' into bugfix/sanAkel/output-b-grid-currents - NOAA-GFDL/MOM6@17afc2b5e A call to pass_vector(...) is needed to correctly do a halo exchange before getting currents in A- or B-grid staggering. Now added. - NOAA-GFDL/MOM6@3fe07d4c6 +Move FMS2 read helper routines into MOM_io_infra - NOAA-GFDL/MOM6@2579d0771 Merge pull request #4 from gustavo-marques/less_checksums_mct_nuopc - NOAA-GFDL/MOM6@66ac81057 Only write checksums from root PE MCT/NUOPC caps - NOAA-GFDL/MOM6@84d5e2176 +FMS2 reads for ints & MOM_read_data_fms2 cleanup - NOAA-GFDL/MOM6@4843c6c4d Merge branch 'dev/gfdl' into FMS2_io - NOAA-GFDL/MOM6@03e174e14 Removed FMS2 MOM_axis and MOM_write_field_fms2 - NOAA-GFDL/MOM6@255233ba3 Added code to write via FMS2 interfaces - NOAA-GFDL/MOM6@0fdc5c438 Correct warnings from categorize_axis - NOAA-GFDL/MOM6@f89ddeaa8 +Add edge_axis argument to write_metadata_axis - NOAA-GFDL/MOM6@ee0152f26 +Separate MOM_interp_infra axistype from MOM_io - NOAA-GFDL/MOM6@09173f7dc Only write checksums from root PE for FMS_cap - NOAA-GFDL/MOM6@30b057116 Merge branch 'dev/gfdl' into FMS2_io - NOAA-GFDL/MOM6@91232095d Merge branch 'dev/gfdl' into FMS2_io - NOAA-GFDL/MOM6@aab2ad645 +Add ability to read fields via FMS2 interfaces - NOAA-GFDL/MOM6@23a78d2f6 Clean up in MOM_restart.F90 - NOAA-GFDL/MOM6@c68fedfea +Change arguments to MOM_register_variable_axes - NOAA-GFDL/MOM6@0ba1aa53e +Simplified read_data_fms2 and write_field_fms2 - NOAA-GFDL/MOM6@f2459ec21 Merge branch 'user/jml/add_fms2io_to_MOM_restart' of https://github.com/wrongkindofdoctor/MOM6 into FMS2_io - NOAA-GFDL/MOM6@a07757314 Explicitly set (1x1) io_domain as a default - NOAA-GFDL/MOM6@d4531ca37 Duplicated infra/FMS1 into infra/FMS2 - NOAA-GFDL/MOM6@f806579bc Correct module use statements in infra/FMS1 - NOAA-GFDL/MOM6@2e46ea6d7 removed errant .true. in save_restart call - NOAA-GFDL/MOM6@809b3ac52 added local logical variables to save restart wrapper that are set using the use_fms2 and write_ic flags if present to avoid invalid memory reference error added str_len argument to register_variable_attribute calls - NOAA-GFDL/MOM6@a74c7eaba changed FMS release to 2020.03-beta1 - NOAA-GFDL/MOM6@5c2daa5da converted save_restart and restore_state to interface that call versions of the routines with the fms-io or fms2-io interfaces added module use statments for fms2_io and MOM_io helper routines to MOM_restart added use_fms2=.true. arguments to save_restart and restore_state calls added write_ic=.true. to the save_restart call in MOM.F90 - NOAA-GFDL/MOM6@40047fa50 Merge pull request #66 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@c8695c621 Merge pull request #65 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@0cf3cb9c9 Merge pull request #64 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@de7f95a57 Merge pull request #63 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@50c353935 Merge pull request #62 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@cbdcf8a52 Create hola_tierra.yml - NOAA-GFDL/MOM6@763b17650 Merge pull request #61 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@ff3412651 Merge pull request #60 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@cea55fec4 Merge pull request #59 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@b8eee455f Merge branch 'dev/gfdl' of github.com:NOAA-GFDL/MOM6 into dev/gfdl - NOAA-GFDL/MOM6@46b8f0fd5 Merge pull request #58 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@ff1a27f59 Merge pull request #57 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@496617cb1 Merge pull request #56 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@e9281f40e Merge pull request #55 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@4a5613400 Merge pull request #54 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@86c2a7dfa Merge pull request #53 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@c24535733 Merge pull request #52 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@8d7be6866 Merge pull request #51 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@7adcc9037 Merge pull request #50 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@aff2a13ab Merge pull request #49 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@477d9f85d Merge pull request #48 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@cee0a2166 Merge pull request #47 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@12dccaf8a Merge pull request #46 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@7dbca83ff Merge pull request #44 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@162ca970b Merge pull request #43 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@abaf004cb Merge pull request #42 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@075ab81e5 Merge pull request #41 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@e072bc7cc Merge in latest dev/gfdl updates (#40) - NOAA-GFDL/MOM6@cae4cfd05 Merge branch 'dev/gfdl' of github.com:wrongkindofdoctor/MOM6 into dev/gfdl - NOAA-GFDL/MOM6@ece60c11e Merge branch 'NOAA-GFDL-dev/gfdl' into dev/gfdl - NOAA-GFDL/MOM6@3e27e4793 Merge branch 'dev/gfdl' of git://github.com/NOAA-GFDL/MOM6 into NOAA-GFDL-dev/gfdl - NOAA-GFDL/MOM6@59109032e Merge pull request #38 from wrongkindofdoctor/revert-37-dev/gfdl - NOAA-GFDL/MOM6@3c15a0c11 Revert "Merge in dev/gfdl updates (#37)" - NOAA-GFDL/MOM6@855d7069d Merge in dev/gfdl updates (#37) - NOAA-GFDL/MOM6@2c32568b7 merge in latest dev/gfdl updates (#36) - NOAA-GFDL/MOM6@09bcebcfe Merge pull request #35 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@124a071e4 Merge pull request #33 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@a427676bd Merge pull request #32 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@0b874f32c Merge pull request #31 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@a5386da98 Merge pull request #30 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@5b2852cde Merge pull request #28 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@22c586562 Merge pull request #27 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@f9b5a7fca Merge pull request #26 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@577208343 Merge pull request #25 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@5589d8cc3 Merge pull request #24 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@aa11e1f66 Merge pull request #23 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@b5e5c48a6 Merge pull request #22 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@911d0a240 Merge pull request #21 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@601eb679c Merge pull request #20 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@b4fd53be9 Merge pull request #19 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@f6879f425 Merge pull request #18 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@139ab1fc0 Merge pull request #17 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@a0c80dcf3 Merge pull request #16 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@42cca4f46 Merge pull request #15 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@a1c556b7f Merge pull request #14 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@f5bc54b67 Merge pull request #13 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@6ffc8976f Merge pull request #12 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@30d35a3c6 Merge pull request #11 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@1304880fb Merge pull request #10 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@522069b31 Merge pull request #9 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@1bbc8de13 Merge pull request #8 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@9aa2aaeb1 Merge pull request #7 from NOAA-GFDL/dev/gfdl - NOAA-GFDL/MOM6@b7f50fcbf Merge remote-tracking branch 'GFDL_MOM6/dev/gfdl' into dev/gfdl merge in latest MOM updates * GFDL_MOM6/dev/gfdl: (220 commits) Update cache dir for /lustre/f2 Update cache dir for /lustre/f2 Calculate height-related diagnostics in Z Set coord_adapt and coord_slight parameters in H Corrected comments in build_zlike_column +Pass max_depth to initialize_regridding in Z Corrected comments in build_sigma_column Combined scaling factors in build_adapt_column Clarified comments in Idealized_Hurricane +Recast MOM_diag_to_Z to work in units of Z +Recast MOM_ALE_sponge to work in units of Z +Added m_to_Z arg to horiz_interp_and_extrap_tracer Find energetic_PBL column height changes in Z +Find diapyc_energy_req column height changes in Z Use local variables to rescale in MOM_Point_Accel Recast MOM_sum_output to work in units of Z Simplify MOM_diagnostics code +Rescale depth inside of MEKE_lengthScales_0d +Add conversion argument to register_static_field Rescale values reported by PointAccel ... - NOAA-GFDL/MOM6@975262dc9 Merge pull request #5 from NOAA-GFDL/dev/gfdl
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The CM4_SIS2 XML refers to mask_tables in ice_ocean_SIS/OM4_025/INPUT that do not exist in the repository. The logic also only refers to one of them (3785) so the logic also needs to be updated once these files are added.
ERROR: A problem with the data file: /ncrc/home1/Alistair.Adcroft/ulm_plus_LowSens_Drag_mom6_2015.01.20/cm4_sis2_compile/src/mom6/ice_ocean_SIS/OM4_025/INPUT/mask_table.3785.90x144
ERROR: A problem with the data file: /ncrc/home1/Alistair.Adcroft/ulm_plus_LowSens_Drag_mom6_2015.01.20/cm4_sis2_compile/src/mom6/ice_ocean_SIS/OM4_025/INPUT/mask_table.1402.72x72
ERROR: A problem with the data file: /ncrc/home1/Alistair.Adcroft/ulm_plus_LowSens_Drag_mom6_2015.01.20/cm4_sis2_compile/src/mom6/ice_ocean_SIS/OM4_025/INPUT/mask_table.622.36x72
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