AEA-3612 Copy getSecrets layer to seperate repo

.devcontainer/Dockerfile

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+FROM mcr.microsoft.com/devcontainers/base:ubuntu
+
+RUN apt-get update \
+    && export DEBIAN_FRONTEND=noninteractive \
+    && apt-get -y dist-upgrade \
+    && apt-get -y install --no-install-recommends htop vim curl git build-essential \
+    libffi-dev libssl-dev libxml2-dev libxslt1-dev libjpeg8-dev libbz2-dev \
+    zlib1g-dev unixodbc unixodbc-dev libsecret-1-0 libsecret-1-dev libsqlite3-dev \
+    jq apt-transport-https ca-certificates gnupg-agent \
+    software-properties-common bash-completion python3-pip make libbz2-dev \
+    libreadline-dev libsqlite3-dev wget llvm libncurses5-dev libncursesw5-dev \
+    xz-utils tk-dev liblzma-dev netcat
+
+# install aws stuff
+RUN wget -O /tmp/awscliv2.zip "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" && \
+    unzip /tmp/awscliv2.zip -d /tmp/aws-cli && \
+    /tmp/aws-cli/aws/install && \
+    rm tmp/awscliv2.zip && \
+    rm -rf /tmp/aws-cli
+
+USER vscode
+
+# Install ASDF
+RUN git clone https://github.com/asdf-vm/asdf.git ~/.asdf --branch v0.11.3; \
+    echo '. $HOME/.asdf/asdf.sh' >> ~/.bashrc; \
+    echo '. $HOME/.asdf/completions/asdf.bash' >> ~/.bashrc;
+
+ENV PATH="$PATH:/home/vscode/.asdf/bin/"
+
+# Install ASDF plugins
+RUN asdf plugin add python; \
+    asdf plugin add poetry https://github.com/asdf-community/asdf-poetry.git; \
+    asdf plugin add shellcheck https://github.com/luizm/asdf-shellcheck.git; \
+    asdf plugin-add direnv; \
+    asdf plugin-add golang https://github.com/kennyp/asdf-golang.git; \
+    asdf plugin add golangci-lint https://github.com/hypnoglow/asdf-golangci-lint.git; \
+    asdf plugin add actionlint;
+
+
+WORKDIR /workspaces/electronic-prescription-service-get-secrets
+ADD .tool-versions /workspaces/electronic-prescription-service-get-secrets/.tool-versions
+ADD .tool-versions /home/vscode/.tool-versions
+
+RUN asdf install; \
+    asdf reshim python; \
+    asdf reshim poetry; \
+    asdf direnv setup --shell bash --version 2.32.2;

.devcontainer/devcontainer.json

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+// For format details, see https://aka.ms/devcontainer.json. For config options, see the
+// README at: https://github.com/devcontainers/templates/tree/main/src/ubuntu
+{
+  "name": "Ubuntu",
+  // Or use a Dockerfile or Docker Compose file. More info: https://containers.dev/guide/dockerfile
+  "build": {
+    "dockerfile": "Dockerfile",
+    "context": "..",
+    "args": {}
+  },
+  "mounts": [
+    "source=${env:HOME}${env:USERPROFILE}/.aws,target=/home/vscode/.aws,type=bind",
+    "source=${env:HOME}${env:USERPROFILE}/.ssh,target=/home/vscode/.ssh,type=bind",
+    "source=${env:HOME}${env:USERPROFILE}/.gnupg,target=/home/vscode/.gnupg,type=bind"
+  ],
+  // Features to add to the dev container. More info: https://containers.dev/features.
+  "features": {
+    "ghcr.io/devcontainers/features/docker-outside-of-docker:1": {
+      "version": "latest",
+      "moby": "true",
+      "installDockerBuildx": "true"
+    }
+  },
+  "customizations": {
+    "vscode": {
+      "extensions": [
+        "AmazonWebServices.aws-toolkit-vscode",
+        "redhat.vscode-yaml",
+        "ms-python.python",
+        "ms-python.flake8",
+        "eamodio.gitlens",
+        "github.vscode-pull-request-github",
+        "lfm.vscode-makefile-term",
+        "GrapeCity.gc-excelviewer",
+        "redhat.vscode-xml",
+        "streetsidesoftware.code-spell-checker",
+        "timonwong.shellcheck",
+        "mkhl.direnv",
+        "github.vscode-github-actions"
+      ],
+      "settings": {
+        "python.defaultInterpreterPath": "/workspaces/electronic-prescription-service-get-secrets/.venv/bin/python",
+        "python.analysis.autoSearchPaths": true,
+        "python.analysis.extraPaths": [],
+        "python.testing.unittestEnabled": false,
+        "python.testing.pytestEnabled": true,
+        "python.linting.pylintEnabled": false,
+        "python.linting.flake8Enabled": true,
+        "python.linting.enabled": true, // required to format on save
+        "editor.formatOnPaste": false, // required
+        "editor.formatOnType": false, // required
+        "editor.formatOnSave": true, // optional
+        "editor.formatOnSaveMode": "file",
+        "cSpell.words": [
+          "fhir",
+          "Formik",
+          "pino",
+          "serialisation"
+        ]
+      }
+    }
+  },
+  "postCreateCommand": "rm -f ~/.docker/config.json; git config --global --add safe.directory /workspaces/electronic-prescription-service-get-secrets; make install; direnv allow ."
+  // "features": {},
+  // Use 'forwardPorts' to make a list of ports inside the container available locally.
+  // "forwardPorts": [],
+  // Use 'postCreateCommand' to run commands after the container is created.
+  // "postCreateCommand": ""
+  // Configure tool-specific properties.
+  // "customizations": {},
+  // Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
+  // "remoteUser": "root"
+}

.github/dependabot.yml

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+#########################################################################
+# Dependabot configuration file
+#########################################################################
+
+version: 2
+updates:
+  - package-ecosystem: "github-actions"
+    # Workflow files stored in the
+    # default location of `.github/workflows`
+    directory: "/"
+    schedule:
+      interval: "daily"
+
+  ###################################
+  # NPM workspace  ##################
+  ###################################
+  - package-ecosystem: "npm"
+    directory: "/"
+    schedule:
+      interval: "daily"
+    versioning-strategy: increase
+
+  ###################################
+  # Poetry  #########################
+  ###################################
+  - package-ecosystem: "pip"
+    directory: "/"
+    schedule:
+      interval: "daily"
+    versioning-strategy: increase

.github/pull_request_template.md

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+## Summary
+
+**Remove items from this list if they are not relevant. Remove this line once this has been done**
+
+- Routine Change
+- :exclamation: Breaking Change
+- :robot: Operational or Infrastructure Change
+- :sparkles: New Feature
+- :warning: Potential issues that might be caused by this change
+
+### Details
+
+Add any summary information of what is in the change. **Remove this line if you have nothing to add.**
+
+## Reviews Required
+
+**Check who should review this. Remove this line once this has been done**
+
+- [x] Dev
+- [ ] Test
+- [ ] Tech Author
+- [ ] Product Owner
+
+## Review Checklist
+
+:information_source: This section is to be filled in by the **reviewer**.
+
+- [ ] I have reviewed the changes in this PR and they fill all or part of the acceptance criteria of the ticket, and the code is in a mergeable state.
+- [ ] If there were infrastructure, operational, or build changes, I have made sure there is sufficient evidence that the changes will work.
+- [ ] I have ensured the jira ticket has been updated with the github pull request link

.github/workflows/build.yml

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+name: build
+
+on:
+  workflow_call:
+    secrets:
+      SONAR_TOKEN:
+        required: true
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          ref: ${{ env.BRANCH_NAME }}
+          fetch-depth: 0
+
+      # using git commit sha for version of action to ensure we have stable version
+      - name: Install asdf
+        uses: asdf-vm/actions/setup@05e0d2ed97b598bfce82fd30daf324ae0c4570e6
+        with:
+          asdf_branch: v0.11.3
+
+      - name: Cache asdf
+        uses: actions/cache@v3
+        with:
+          path: |
+            ~/.asdf
+          key: ${{ runner.os }}-asdf-${{ hashFiles('**/.tool-versions') }}
+          restore-keys: |
+            ${{ runner.os }}-asdf-
+
+      - name: Install asdf dependencies in .tool-versions
+        uses: asdf-vm/actions/install@05e0d2ed97b598bfce82fd30daf324ae0c4570e6
+        with:
+          asdf_branch: v0.11.3
+        env:
+          PYTHON_CONFIGURE_OPTS: --enable-shared 
+
+      - name: make install
+        run: |
+          make install
+
+      - name: run check-licenses
+        run: make check-licenses
+
+      - name: run lint
+        run: make lint
+
+      - name: run compile-go
+        run: make compile-go

.github/workflows/combine-dependabot-prs.yml

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+name: 'Combine PRs'
+
+# Controls when the action will run - in this case triggered manually
+on:
+  workflow_dispatch:
+    inputs:
+      branchPrefix:
+        description: 'Branch prefix to find combinable PRs based on'
+        required: true
+        default: 'dependabot'
+      mustBeGreen:
+        description: 'Only combine PRs that are green (status is success)'
+        required: true
+        default: "true"
+      combineBranchName:
+        description: 'Name of the branch to combine PRs into'
+        required: true
+        default: 'combine-dependabot-PRs'
+      ignoreLabel:
+        description: 'Exclude PRs with this label'
+        required: true
+        default: 'nocombine'
+
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+  # This workflow contains a single job called "combine-prs"
+  combine-prs:
+    # The type of runner that the job will run on
+    runs-on: ubuntu-latest
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+      - uses: actions/github-script@v7
+        id: create-combined-pr
+        name: Create Combined PR
+        with:
+          github-token: ${{secrets.GITHUB_TOKEN}}
+          script: |
+            const pulls = await github.paginate('GET /repos/:owner/:repo/pulls', {
+              owner: context.repo.owner,
+              repo: context.repo.repo
+            });
+            let branchesAndPRStrings = [];
+            let baseBranch = null;
+            let baseBranchSHA = null;
+            for (const pull of pulls) {
+              const branch = pull['head']['ref'];
+              console.log('Pull for branch: ' + branch);
+              if (branch.startsWith('${{ github.event.inputs.branchPrefix }}')) {
+                console.log('Branch matched prefix: ' + branch);
+                let statusOK = true;
+                if(${{ github.event.inputs.mustBeGreen }}) {
+                  console.log('Checking green status: ' + branch);
+                  const stateQuery = `query($owner: String!, $repo: String!, $pull_number: Int!) {
+                    repository(owner: $owner, name: $repo) {
+                      pullRequest(number:$pull_number) {
+                        commits(last: 1) {
+                          nodes {
+                            commit {
+                              statusCheckRollup {
+                                state
+                              }
+                            }
+                          }
+                        }
+                      }
+                    }
+                  }`
+                  const vars = {
+                    owner: context.repo.owner,
+                    repo: context.repo.repo,
+                    pull_number: pull['number']
+                  };
+                  const result = await github.graphql(stateQuery, vars);
+                  const [{ commit }] = result.repository.pullRequest.commits.nodes;
+                  const state = commit.statusCheckRollup.state
+                  console.log('Validating status: ' + state);
+                  if(state != 'SUCCESS') {
+                    console.log('Discarding ' + branch + ' with status ' + state);
+                    statusOK = false;
+                  }
+                }
+                console.log('Checking labels: ' + branch);
+                const labels = pull['labels'];
+                for(const label of labels) {
+                  const labelName = label['name'];
+                  console.log('Checking label: ' + labelName);
+                  if(labelName == '${{ github.event.inputs.ignoreLabel }}') {
+                    console.log('Discarding ' + branch + ' with label ' + labelName);
+                    statusOK = false;
+                  }
+                }
+                if (statusOK) {
+                  console.log('Adding branch to array: ' + branch);
+                  const prString = '#' + pull['number'] + ' ' + pull['title'];
+                  branchesAndPRStrings.push({ branch, prString });
+                  baseBranch = pull['base']['ref'];
+                  baseBranchSHA = pull['base']['sha'];
+                }
+              }
+            }
+            if (branchesAndPRStrings.length == 0) {
+              core.setFailed('No PRs/branches matched criteria');
+              return;
+            }
+            try {
+              await github.rest.git.createRef({
+                owner: context.repo.owner,
+                repo: context.repo.repo,
+                ref: 'refs/heads/' + '${{ github.event.inputs.combineBranchName }}',
+                sha: baseBranchSHA
+              });
+            } catch (error) {
+              console.log(error);
+              core.setFailed('Failed to create combined branch - maybe a branch by that name already exists?');
+              return;
+            }
+
+            let combinedPRs = [];
+            let mergeFailedPRs = [];
+            for(const { branch, prString } of branchesAndPRStrings) {
+              try {
+                await github.rest.repos.merge({
+                  owner: context.repo.owner,
+                  repo: context.repo.repo,
+                  base: '${{ github.event.inputs.combineBranchName }}',
+                  head: branch,
+                });
+                console.log('Merged branch ' + branch);
+                combinedPRs.push(prString);
+              } catch (error) {
+                console.log('Failed to merge branch ' + branch);
+                mergeFailedPRs.push(prString);
+              }
+            }
+
+            console.log('Creating combined PR');
+            const combinedPRsString = combinedPRs.join('\n');
+            let body = '✅ This PR was created by the Combine PRs action by combining the following PRs:\n' + combinedPRsString;
+            if(mergeFailedPRs.length > 0) {
+              const mergeFailedPRsString = mergeFailedPRs.join('\n');
+              body += '\n\n⚠️ The following PRs were left out due to merge conflicts:\n' + mergeFailedPRsString
+            }
+            await github.rest.pulls.create({
+              owner: context.repo.owner,
+              repo: context.repo.repo,
+              title: 'Combined PR',
+              head: '${{ github.event.inputs.combineBranchName }}',
+              base: baseBranch,
+              body: body
+            });