Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Bump numpy from 1.21.0 to 1.22.0 in /docs #150

Merged
merged 1 commit into from
Jun 22, 2022

Conversation

dependabot[bot]
Copy link
Contributor

@dependabot dependabot bot commented on behalf of github Jun 22, 2022

Bumps numpy from 1.21.0 to 1.22.0.

Release notes

Sourced from numpy's releases.

v1.22.0

NumPy 1.22.0 Release Notes

NumPy 1.22.0 is a big release featuring the work of 153 contributors spread over 609 pull requests. There have been many improvements, highlights are:

  • Annotations of the main namespace are essentially complete. Upstream is a moving target, so there will likely be further improvements, but the major work is done. This is probably the most user visible enhancement in this release.
  • A preliminary version of the proposed Array-API is provided. This is a step in creating a standard collection of functions that can be used across application such as CuPy and JAX.
  • NumPy now has a DLPack backend. DLPack provides a common interchange format for array (tensor) data.
  • New methods for quantile, percentile, and related functions. The new methods provide a complete set of the methods commonly found in the literature.
  • A new configurable allocator for use by downstream projects.

These are in addition to the ongoing work to provide SIMD support for commonly used functions, improvements to F2PY, and better documentation.

The Python versions supported in this release are 3.8-3.10, Python 3.7 has been dropped. Note that 32 bit wheels are only provided for Python 3.8 and 3.9 on Windows, all other wheels are 64 bits on account of Ubuntu, Fedora, and other Linux distributions dropping 32 bit support. All 64 bit wheels are also linked with 64 bit integer OpenBLAS, which should fix the occasional problems encountered by folks using truly huge arrays.

Expired deprecations

Deprecated numeric style dtype strings have been removed

Using the strings "Bytes0", "Datetime64", "Str0", "Uint32", and "Uint64" as a dtype will now raise a TypeError.

(gh-19539)

Expired deprecations for loads, ndfromtxt, and mafromtxt in npyio

numpy.loads was deprecated in v1.15, with the recommendation that users use pickle.loads instead. ndfromtxt and mafromtxt were both deprecated in v1.17 - users should use numpy.genfromtxt instead with the appropriate value for the usemask parameter.

(gh-19615)

... (truncated)

Commits

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
  • @dependabot use these labels will set the current labels as the default for future PRs for this repo and language
  • @dependabot use these reviewers will set the current reviewers as the default for future PRs for this repo and language
  • @dependabot use these assignees will set the current assignees as the default for future PRs for this repo and language
  • @dependabot use this milestone will set the current milestone as the default for future PRs for this repo and language

You can disable automated security fix PRs for this repo from the Security Alerts page.

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Jun 22, 2022
@JannisHoch JannisHoch merged commit 8d350a4 into dev Jun 22, 2022
@dependabot dependabot bot deleted the dependabot/pip/docs/numpy-1.22.0 branch June 22, 2022 07:39
Sophiepieternel1 pushed a commit that referenced this pull request Jul 22, 2023
Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
JannisHoch added a commit that referenced this pull request Jan 12, 2024
* Create pythonpublish.yml

* updated to 0.1.0 including pip support

* Create .pypirc

* removed token

* corrected file name

* removed GDAL dep

* updated file content

* corrected folder name

* version 0.1.1, now REALLY with pip and github actions

* updated pypi installation instruction

* added quantiles

* added sanity checks

* writing geojson instead shp

* Bump pip from 20.0.2 to 21.1

Bumps [pip](https://github.com/pypa/pip) from 20.0.2 to 21.1.
- [Release notes](https://github.com/pypa/pip/releases)
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@20.0.2...21.1)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3 in /docs

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0 in /docs

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.21.0 to 1.22.0 in /docs (#150)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump numpy from 1.21.0 to 1.22.0 (#151)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 (#153)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 in /docs (#152)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 in /docs (#158)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 (#154)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 in /docs (#155)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump wheel from 0.33.6 to 0.38.1 in /docs (#156)

Bumps [wheel](https://github.com/pypa/wheel) from 0.33.6 to 0.38.1.
- [Release notes](https://github.com/pypa/wheel/releases)
- [Changelog](https://github.com/pypa/wheel/blob/main/docs/news.rst)
- [Commits](pypa/wheel@0.33.6...0.38.1)

---
updated-dependencies:
- dependency-name: wheel
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 (#157)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 in /docs (#159)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 (#160)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* updated dependencies (#161)

* v0.1.2 (#162)

* updated dependencies

* correct dtype of list with selection conflict type

* got rid of fiona requirement

* improved downloading of example data

* deprecated plotting for now

as sklearn API has changed

* v0.1.2

* Bump pip from 21.1 to 23.3 (#183)

Bumps [pip](https://github.com/pypa/pip) from 21.1 to 23.3.
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@21.1...23.3)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump jinja2 from 2.11.3 to 3.1.3 in /docs (#184)

Bumps [jinja2](https://github.com/pallets/jinja) from 2.11.3 to 3.1.3.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](pallets/jinja@2.11.3...3.1.3)

---
updated-dependencies:
- dependency-name: jinja2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
JannisHoch added a commit that referenced this pull request Dec 11, 2024
* Create pythonpublish.yml

* updated to 0.1.0 including pip support

* Create .pypirc

* removed token

* corrected file name

* removed GDAL dep

* updated file content

* corrected folder name

* version 0.1.1, now REALLY with pip and github actions

* updated pypi installation instruction

* added quantiles

* added sanity checks

* writing geojson instead shp

* Bump pip from 20.0.2 to 21.1

Bumps [pip](https://github.com/pypa/pip) from 20.0.2 to 21.1.
- [Release notes](https://github.com/pypa/pip/releases)
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@20.0.2...21.1)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3 in /docs

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0 in /docs

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.21.0 to 1.22.0 in /docs (#150)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump numpy from 1.21.0 to 1.22.0 (#151)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 (#153)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 in /docs (#152)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 in /docs (#158)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 (#154)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 in /docs (#155)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump wheel from 0.33.6 to 0.38.1 in /docs (#156)

Bumps [wheel](https://github.com/pypa/wheel) from 0.33.6 to 0.38.1.
- [Release notes](https://github.com/pypa/wheel/releases)
- [Changelog](https://github.com/pypa/wheel/blob/main/docs/news.rst)
- [Commits](pypa/wheel@0.33.6...0.38.1)

---
updated-dependencies:
- dependency-name: wheel
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 (#157)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 in /docs (#159)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 (#160)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* updated dependencies (#161)

* v0.1.2 (#162)

* updated dependencies

* correct dtype of list with selection conflict type

* got rid of fiona requirement

* improved downloading of example data

* deprecated plotting for now

as sklearn API has changed

* v0.1.2

* Bump pip from 21.1 to 23.3 (#183)

Bumps [pip](https://github.com/pypa/pip) from 21.1 to 23.3.
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@21.1...23.3)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump jinja2 from 2.11.3 to 3.1.3 in /docs (#184)

Bumps [jinja2](https://github.com/pallets/jinja) from 2.11.3 to 3.1.3.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](pallets/jinja@2.11.3...3.1.3)

---
updated-dependencies:
- dependency-name: jinja2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update and freeze deps (#186)

* some cleaning up

* precommit hooks

* models.py as object-based

* object based machine_learning.py

* moving functions here

* object based models.py

* removed some unnecesssary functions

* updates because of moved function

* starting to clean up data.py mess

* Object based and more (#187)

* cleaning up evaluation.py

* parsing and collecting of settings/configurations in separate file

* separate file for I/O functions

* clean up

* removed outdated tests

* improving selection.py

* Update CODE_OF_CONDUCT.md

* updated and moved functions in conflicts.py

* cosmetic changes to machine_learning.py

* put all neighbours related functions in one file

* updating data.py, resp. what is now called xydata.py

* moved run_prediction func from ppeline.py to models.py

* updated cli script

* Debug copro runner (#188)

* works up to ML part

* debugging some eval functions

* reference run works via command line; removed feature importance for now

* loop over n_runs now part of models.py

* rename

* minor improvements

* defining projection period works now (again)

* projections succesfully run

* completed docstrings and typehints

* improving console out

* watprovID now always a kwarg (#189)

* Fix rtd (#190)

* restart doc

* updated dependencis

* removed out-dated duplicate

* next take

* added pydata-sphinx-theme dep

* using conda for rtd

* bla

* add mock

* sphinx works locally at least

* splitting docs in source and make

* blabla

* no copro dep in conf.py

* add installation instructions

* added static data

* Fix rtd (#191)

* restart doc

* updated dependencis

* removed out-dated duplicate

* next take

* added pydata-sphinx-theme dep

* using conda for rtd

* bla

* add mock

* sphinx works locally at least

* splitting docs in source and make

* blabla

* no copro dep in conf.py

* add installation instructions

* added static data

* added API partially

* updated installation

* GridsearchCV (#192)

* possible to tune hyperparameters of each RFC instance

* n_jobs and verbose as click options

* applying gridsearchcv works as expected

* updated example settings

* extended documentation

* computing permutation importance for each run n with 10 permutations (#193)

* lag time as constant; removed distutils

* Bump setuptools from 69.0.3 to 70.0.0 (#198)

Bumps [setuptools](https://github.com/pypa/setuptools) from 69.0.3 to 70.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst)
- [Commits](pypa/setuptools@v69.0.3...v70.0.0)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump scikit-learn from 1.3.2 to 1.5.0 (#197)

Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 1.3.2 to 1.5.0.
- [Release notes](https://github.com/scikit-learn/scikit-learn/releases)
- [Commits](scikit-learn/scikit-learn@1.3.2...1.5.0)

---
updated-dependencies:
- dependency-name: scikit-learn
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Add ACLED support and use "yaml" file type for model settings (#199)

* first steps

* Switch from cfg to yaml (#194)

* parse YAML file

* parsing settings from YAML-file works

* improved conflict property selection based on YAML-file input

* fix _clip_to_extent

* reading indicator data works, also with options

* adding poly_id and conflict_id

* added todos

* fixed problem with perm. importance and debugged workflow to be compatible with yaml input

* add KFold to GridSearchCV

* Better NaN handling and dataframe support (#200)

* option for either Regression or Classification model

* fine tuned selection of conflict data points

* option to provide ML target variable

* use simulation_name as output dir

* data extraction from netCDF files in a separate function

* target variable and estimator used determined in main script

* should belong to previous commit

* first step towards flexible target_vars when extracting conflict (Y) data

* added class docstrings

* constructing X and Y data as dataframes instead of arrays

* no log-scale support for now, more consistent treatment of polygons w/o feature data

* removing all polygons with 1 or more NaNs

* fully pd.dataframe support implemented

* save only selected conflicts which fall in simulation period

* finetuning print output

* Fix/projections (#201)

* option for either Regression or Classification model

* fine tuned selection of conflict data points

* option to provide ML target variable

* use simulation_name as output dir

* data extraction from netCDF files in a separate function

* target variable and estimator used determined in main script

* should belong to previous commit

* first step towards flexible target_vars when extracting conflict (Y) data

* added class docstrings

* constructing X and Y data as dataframes instead of arrays

* no log-scale support for now, more consistent treatment of polygons w/o feature data

* removing all polygons with 1 or more NaNs

* fully pd.dataframe support implemented

* save only selected conflicts which fall in simulation period

* finetuning print output

* no random state set for Kfold in GridSearchCV to ensure all n models are fitted on different data

* better handling of cores via command line

* remove content of output dir to avoid conflicts with expected files

* settings parsed for projections with new yaml file structure

* udpated docstring for load_estimators

* fixed definition of projection period

* reinitated initiate_X_data function

* saving files as GPKG instead GeoJSON

* no output for None output from rasterstats

* make run_prediction() work

* apply isort

* no ML target var for nwo

* fix Geopandas driver

* corrected number of function arguments

* Bump scikit-learn from 0.22.1 to 1.5.0 in /docs (#205)

Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 0.22.1 to 1.5.0.
- [Release notes](https://github.com/scikit-learn/scikit-learn/releases)
- [Commits](scikit-learn/scikit-learn@0.22.1...1.5.0)

---
updated-dependencies:
- dependency-name: scikit-learn
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 65.5.1 to 70.0.0 in /docs (#204)

Bumps [setuptools](https://github.com/pypa/setuptools) from 65.5.1 to 70.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst)
- [Commits](pypa/setuptools@v65.5.1...v70.0.0)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump jinja2 from 3.1.3 to 3.1.4 in /docs (#203)

Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.3 to 3.1.4.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](pallets/jinja@3.1.3...3.1.4)

---
updated-dependencies:
- dependency-name: jinja2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
JannisHoch added a commit that referenced this pull request Dec 20, 2024
* Create pythonpublish.yml

* updated to 0.1.0 including pip support

* Create .pypirc

* removed token

* corrected file name

* removed GDAL dep

* updated file content

* corrected folder name

* version 0.1.1, now REALLY with pip and github actions

* updated pypi installation instruction

* added quantiles

* added sanity checks

* writing geojson instead shp

* Bump pip from 20.0.2 to 21.1

Bumps [pip](https://github.com/pypa/pip) from 20.0.2 to 21.1.
- [Release notes](https://github.com/pypa/pip/releases)
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@20.0.2...21.1)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3 in /docs

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump ipython from 7.13.0 to 7.16.3

Bumps [ipython](https://github.com/ipython/ipython) from 7.13.0 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.13.0...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.18.1 to 1.21.0 in /docs

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.1 to 1.21.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt)
- [Commits](numpy/numpy@v1.18.1...v1.21.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Bump numpy from 1.21.0 to 1.22.0 in /docs (#150)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump numpy from 1.21.0 to 1.22.0 (#151)

Bumps [numpy](https://github.com/numpy/numpy) from 1.21.0 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](numpy/numpy@v1.21.0...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 (#153)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 5.6.1 to 6.3.0 in /docs (#152)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 5.6.1 to 6.3.0.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@5.6.1...6.3.0)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 in /docs (#158)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 (#154)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump nbconvert from 6.3.0 to 6.5.1 in /docs (#155)

Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.3.0 to 6.5.1.
- [Release notes](https://github.com/jupyter/nbconvert/releases)
- [Commits](jupyter/nbconvert@6.3.0...6.5.1)

---
updated-dependencies:
- dependency-name: nbconvert
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump wheel from 0.33.6 to 0.38.1 in /docs (#156)

Bumps [wheel](https://github.com/pypa/wheel) from 0.33.6 to 0.38.1.
- [Release notes](https://github.com/pypa/wheel/releases)
- [Changelog](https://github.com/pypa/wheel/blob/main/docs/news.rst)
- [Commits](pypa/wheel@0.33.6...0.38.1)

---
updated-dependencies:
- dependency-name: wheel
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 49.6 to 65.5.1 (#157)

Bumps [setuptools](https://github.com/pypa/setuptools) from 49.6 to 65.5.1.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/CHANGES.rst)
- [Commits](pypa/setuptools@v49.6.0...v65.5.1)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 in /docs (#159)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump ipython from 7.16.3 to 8.10.0 (#160)

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.3 to 8.10.0.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@7.16.3...8.10.0)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* updated dependencies (#161)

* v0.1.2 (#162)

* updated dependencies

* correct dtype of list with selection conflict type

* got rid of fiona requirement

* improved downloading of example data

* deprecated plotting for now

as sklearn API has changed

* v0.1.2

* Bump pip from 21.1 to 23.3 (#183)

Bumps [pip](https://github.com/pypa/pip) from 21.1 to 23.3.
- [Changelog](https://github.com/pypa/pip/blob/main/NEWS.rst)
- [Commits](pypa/pip@21.1...23.3)

---
updated-dependencies:
- dependency-name: pip
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump jinja2 from 2.11.3 to 3.1.3 in /docs (#184)

Bumps [jinja2](https://github.com/pallets/jinja) from 2.11.3 to 3.1.3.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](pallets/jinja@2.11.3...3.1.3)

---
updated-dependencies:
- dependency-name: jinja2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update and freeze deps (#186)

* some cleaning up

* precommit hooks

* models.py as object-based

* object based machine_learning.py

* moving functions here

* object based models.py

* removed some unnecesssary functions

* updates because of moved function

* starting to clean up data.py mess

* Object based and more (#187)

* cleaning up evaluation.py

* parsing and collecting of settings/configurations in separate file

* separate file for I/O functions

* clean up

* removed outdated tests

* improving selection.py

* Update CODE_OF_CONDUCT.md

* updated and moved functions in conflicts.py

* cosmetic changes to machine_learning.py

* put all neighbours related functions in one file

* updating data.py, resp. what is now called xydata.py

* moved run_prediction func from ppeline.py to models.py

* updated cli script

* Debug copro runner (#188)

* works up to ML part

* debugging some eval functions

* reference run works via command line; removed feature importance for now

* loop over n_runs now part of models.py

* rename

* minor improvements

* defining projection period works now (again)

* projections succesfully run

* completed docstrings and typehints

* improving console out

* watprovID now always a kwarg (#189)

* Fix rtd (#190)

* restart doc

* updated dependencis

* removed out-dated duplicate

* next take

* added pydata-sphinx-theme dep

* using conda for rtd

* bla

* add mock

* sphinx works locally at least

* splitting docs in source and make

* blabla

* no copro dep in conf.py

* add installation instructions

* added static data

* Fix rtd (#191)

* restart doc

* updated dependencis

* removed out-dated duplicate

* next take

* added pydata-sphinx-theme dep

* using conda for rtd

* bla

* add mock

* sphinx works locally at least

* splitting docs in source and make

* blabla

* no copro dep in conf.py

* add installation instructions

* added static data

* added API partially

* updated installation

* GridsearchCV (#192)

* possible to tune hyperparameters of each RFC instance

* n_jobs and verbose as click options

* applying gridsearchcv works as expected

* updated example settings

* extended documentation

* computing permutation importance for each run n with 10 permutations (#193)

* lag time as constant; removed distutils

* Bump setuptools from 69.0.3 to 70.0.0 (#198)

Bumps [setuptools](https://github.com/pypa/setuptools) from 69.0.3 to 70.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst)
- [Commits](pypa/setuptools@v69.0.3...v70.0.0)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump scikit-learn from 1.3.2 to 1.5.0 (#197)

Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 1.3.2 to 1.5.0.
- [Release notes](https://github.com/scikit-learn/scikit-learn/releases)
- [Commits](scikit-learn/scikit-learn@1.3.2...1.5.0)

---
updated-dependencies:
- dependency-name: scikit-learn
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Add ACLED support and use "yaml" file type for model settings (#199)

* first steps

* Switch from cfg to yaml (#194)

* parse YAML file

* parsing settings from YAML-file works

* improved conflict property selection based on YAML-file input

* fix _clip_to_extent

* reading indicator data works, also with options

* adding poly_id and conflict_id

* added todos

* fixed problem with perm. importance and debugged workflow to be compatible with yaml input

* add KFold to GridSearchCV

* Better NaN handling and dataframe support (#200)

* option for either Regression or Classification model

* fine tuned selection of conflict data points

* option to provide ML target variable

* use simulation_name as output dir

* data extraction from netCDF files in a separate function

* target variable and estimator used determined in main script

* should belong to previous commit

* first step towards flexible target_vars when extracting conflict (Y) data

* added class docstrings

* constructing X and Y data as dataframes instead of arrays

* no log-scale support for now, more consistent treatment of polygons w/o feature data

* removing all polygons with 1 or more NaNs

* fully pd.dataframe support implemented

* save only selected conflicts which fall in simulation period

* finetuning print output

* Fix/projections (#201)

* option for either Regression or Classification model

* fine tuned selection of conflict data points

* option to provide ML target variable

* use simulation_name as output dir

* data extraction from netCDF files in a separate function

* target variable and estimator used determined in main script

* should belong to previous commit

* first step towards flexible target_vars when extracting conflict (Y) data

* added class docstrings

* constructing X and Y data as dataframes instead of arrays

* no log-scale support for now, more consistent treatment of polygons w/o feature data

* removing all polygons with 1 or more NaNs

* fully pd.dataframe support implemented

* save only selected conflicts which fall in simulation period

* finetuning print output

* no random state set for Kfold in GridSearchCV to ensure all n models are fitted on different data

* better handling of cores via command line

* remove content of output dir to avoid conflicts with expected files

* settings parsed for projections with new yaml file structure

* udpated docstring for load_estimators

* fixed definition of projection period

* reinitated initiate_X_data function

* saving files as GPKG instead GeoJSON

* no output for None output from rasterstats

* make run_prediction() work

* apply isort

* no ML target var for nwo

* fix Geopandas driver

* corrected number of function arguments

* Bump scikit-learn from 0.22.1 to 1.5.0 in /docs (#205)

Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 0.22.1 to 1.5.0.
- [Release notes](https://github.com/scikit-learn/scikit-learn/releases)
- [Commits](scikit-learn/scikit-learn@0.22.1...1.5.0)

---
updated-dependencies:
- dependency-name: scikit-learn
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump setuptools from 65.5.1 to 70.0.0 in /docs (#204)

Bumps [setuptools](https://github.com/pypa/setuptools) from 65.5.1 to 70.0.0.
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst)
- [Commits](pypa/setuptools@v65.5.1...v70.0.0)

---
updated-dependencies:
- dependency-name: setuptools
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Bump jinja2 from 3.1.3 to 3.1.4 in /docs (#203)

Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.3 to 3.1.4.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](pallets/jinja@3.1.3...3.1.4)

---
updated-dependencies:
- dependency-name: jinja2
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update CITATION.cff

* Update setup.py

v2.0.1

* Update setup.cfg

v2.0.1

* Update __init__.py

v2.0.1

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
dependencies Pull requests that update a dependency file
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant