Make path relative after BibTeX-from-PDF import #2962
Workflow file for this run
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| name: Deployment (macOS/ARM64) | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - main-release | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'src/test/**' | |
| - 'README.md' | |
| tags: | |
| - '*' | |
| pull_request: | |
| merge_group: | |
| workflow_dispatch: | |
| inputs: | |
| notarization: | |
| type: boolean | |
| required: false | |
| default: false | |
| env: | |
| SpringerNatureAPIKey: ${{ secrets.SpringerNatureAPIKey }} | |
| AstrophysicsDataSystemAPIKey: ${{ secrets.AstrophysicsDataSystemAPIKey }} | |
| IEEEAPIKey: ${{ secrets.IEEEAPIKey }} | |
| BiodiversityHeritageApiKey: ${{ secrets.BiodiversityHeritageApiKey}} | |
| OSXCERT: ${{ secrets.OSX_SIGNING_CERT }} | |
| GRADLE_OPTS: -Xmx4g -Dorg.gradle.daemon=false -Dorg.gradle.vfs.watch=false | |
| JAVA_OPTS: -Xmx4g | |
| concurrency: | |
| group: "${{ github.workflow }}-${{ github.head_ref || github.ref }}" | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: macos-14 | |
| displayName: macOS (ARM64) | |
| suffix: '_arm64' | |
| runs-on: ${{ matrix.os }} | |
| outputs: | |
| major: ${{ steps.gitversion.outputs.Major }} | |
| minor: ${{ steps.gitversion.outputs.Minor }} | |
| branchname: ${{ steps.gitversion.outputs.branchName }} | |
| name: Create installer and portable version for ${{ matrix.displayName }} | |
| steps: | |
| - name: Check secrets presence | |
| id: checksecrets | |
| shell: bash | |
| run: | | |
| if [ "$BUILDJABREFPRIVATEKEY" == "" ]; then | |
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | |
| echo "❌ Secret BUILDJABREFPRIVATEKEY not present" | |
| else | |
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | |
| echo "✔️ Secret BUILDJABREFPRIVATEKEY present" | |
| fi | |
| env: | |
| BUILDJABREFPRIVATEKEY: ${{ secrets.buildJabRefPrivateKey }} | |
| - name: Fetch all history for all tags and branches | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: 'true' | |
| show-progress: 'false' | |
| - name: Install GitVersion | |
| uses: gittools/actions/gitversion/[email protected] | |
| with: | |
| versionSpec: "5.x" | |
| - name: Run GitVersion | |
| id: gitversion | |
| uses: gittools/actions/gitversion/[email protected] | |
| - name: Setup JDK | |
| uses: actions/setup-java@v4 | |
| with: | |
| java-version: 21.0.2 | |
| distribution: 'temurin' | |
| - name: Clean up keychain | |
| run: | | |
| security delete-keychain signing_temp.keychain ${{runner.temp}}/keychain/notarization.keychain || true | |
| - name: Setup OSX key chain on macOS-arm | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: slidoapp/import-codesign-certs@1923310662e8682dd05b76b612b53301f431cd5d | |
| with: | |
| p12-file-base64: ${{ secrets.OSX_SIGNING_CERT }} | |
| p12-password: ${{ secrets.OSX_CERT_PWD }} | |
| keychain-password: jabref | |
| - name: Setup OSX key chain on OSX for app id cert | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: slidoapp/import-codesign-certs@1923310662e8682dd05b76b612b53301f431cd5d | |
| with: | |
| p12-file-base64: ${{ secrets.OSX_SIGNING_CERT_APPLICATION }} | |
| p12-password: ${{ secrets.OSX_CERT_PWD }} | |
| create-keychain: false | |
| keychain-password: jabref | |
| - name: Setup Gradle | |
| uses: gradle/actions/setup-gradle@v3 | |
| with: | |
| gradle-home-cache-cleanup: true | |
| - name: Prepare merged jars and modules dir (macOS) | |
| run: ./gradlew -i -PprojVersion="${{ steps.gitversion.outputs.AssemblySemVer }}" -PprojVersionInfo="${{ steps.gitversion.outputs.InformationalVersion }}" prepareModulesDir | |
| - name: Build dmg (macOS) | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| jpackage \ | |
| --module org.jabref/org.jabref.Launcher \ | |
| --module-path ${{env.JAVA_HOME}}/jmods/:build/jlinkbase/jlinkjars \ | |
| --add-modules org.jabref,org.jabref.merged.module \ | |
| --add-modules jdk.incubator.vector \ | |
| --dest build/distribution \ | |
| --app-content buildres/mac/jabrefHost.py \ | |
| --app-content buildres/mac/native-messaging-host \ | |
| --name JabRef \ | |
| --app-version ${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }} \ | |
| --verbose \ | |
| --mac-sign \ | |
| --vendor "JabRef e.V." \ | |
| --mac-package-identifier JabRef \ | |
| --mac-package-name JabRef \ | |
| --type dmg --mac-signing-key-user-name "JabRef e.V. (6792V39SK3)" \ | |
| --mac-package-signing-prefix org.jabref \ | |
| --mac-entitlements buildres/mac/jabref.entitlements \ | |
| --icon src/main/resources/icons/jabref.icns \ | |
| --resource-dir buildres/mac \ | |
| --file-associations buildres/mac/bibtexAssociations.properties \ | |
| --jlink-options --bind-services \ | |
| --java-options --add-exports=javafx.base/com.sun.javafx.event=org.jabref.merged.module \ | |
| --java-options --add-exports=javafx.controls/com.sun.javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.graphics/javafx.scene=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control.skin=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/com.sun.javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref \ | |
| --java-options --add-exports=javafx.base/com.sun.javafx.event=org.jabref \ | |
| --java-options --add-exports=javafx.controls/com.sun.javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.graphics/javafx.scene=org.jabref \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.controls/com.sun.javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.base/javafx.collections=org.jabref \ | |
| --java-options --add-opens=javafx.base/javafx.collections.transformation=org.jabref \ | |
| --java-options --add-modules=jdk.incubator.vector | |
| - name: Build pkg (macOS) | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| jpackage \ | |
| --module org.jabref/org.jabref.Launcher \ | |
| --module-path ${{env.JAVA_HOME}}/jmods/:build/jlinkbase/jlinkjars \ | |
| --add-modules org.jabref,org.jabref.merged.module \ | |
| --add-modules jdk.incubator.vector \ | |
| --dest build/distribution \ | |
| --app-content buildres/mac/jabrefHost.py \ | |
| --app-content buildres/mac/native-messaging-host \ | |
| --name JabRef \ | |
| --app-version ${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }} \ | |
| --verbose \ | |
| --mac-sign \ | |
| --vendor "JabRef e.V." \ | |
| --mac-package-identifier JabRef \ | |
| --mac-package-name JabRef \ | |
| --type pkg --mac-signing-key-user-name "JabRef e.V. (6792V39SK3)" \ | |
| --mac-package-signing-prefix org.jabref \ | |
| --mac-entitlements buildres/mac/jabref.entitlements \ | |
| --icon src/main/resources/icons/jabref.icns \ | |
| --resource-dir buildres/mac \ | |
| --file-associations buildres/mac/bibtexAssociations.properties \ | |
| --jlink-options --bind-services \ | |
| --java-options --add-exports=javafx.base/com.sun.javafx.event=org.jabref.merged.module \ | |
| --java-options --add-exports=javafx.controls/com.sun.javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.graphics/javafx.scene=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/com.sun.javafx.scene.control=org.jabref.merged.module \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref \ | |
| --java-options --add-exports=javafx.base/com.sun.javafx.event=org.jabref \ | |
| --java-options --add-exports=javafx.controls/com.sun.javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.graphics/javafx.scene=org.jabref \ | |
| --java-options --add-opens=javafx.controls/javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.controls/com.sun.javafx.scene.control=org.jabref \ | |
| --java-options --add-opens=javafx.base/javafx.collections=org.jabref \ | |
| --java-options --add-opens=javafx.base/javafx.collections.transformation=org.jabref \ | |
| --java-options --add-modules=jdk.incubator.vector | |
| - name: Rename files with arm64 suffix as well | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| mv build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.dmg build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}-arm64.dmg | |
| mv build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.pkg build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}-arm64.pkg | |
| - name: Setup rsync (macOS) | |
| if: ${{ (!startsWith(github.ref, 'refs/heads/gh-readonly-queue')) && (steps.checksecrets.outputs.secretspresent == 'YES') && ((matrix.os == 'macos-14') && !((startsWith(github.ref, 'refs/tags/') || inputs.notarization == true))) }} | |
| run: brew install rsync | |
| - name: Setup SSH key | |
| if: ${{ (steps.checksecrets.outputs.secretspresent == 'YES') && (!startsWith(github.ref, 'refs/heads/gh-readonly-queue')) && ((matrix.os != 'macos-14') || !((startsWith(github.ref, 'refs/tags/') || (inputs.notarization == true)))) }} | |
| run: | | |
| echo "${{ secrets.buildJabRefPrivateKey }}" > sshkey | |
| chmod 600 sshkey | |
| - name: Upload to builds.jabref.org (linux, macOS) | |
| # macOS: Negated condition of "Upload to GitHub workflow artifacts store (macOS)" | |
| # Reason: We either upload the non-notarized files - or notarize the files later (and upload these later) | |
| # needs to be on one line; multi line does not work | |
| if: ${{ (!startsWith(github.ref, 'refs/heads/gh-readonly-queue')) && (steps.checksecrets.outputs.secretspresent == 'YES') && ((matrix.os == 'ubuntu-latest') || ((matrix.os == 'macos-14') && !((startsWith(github.ref, 'refs/tags/') || inputs.notarization == true)))) }} | |
| shell: bash | |
| run: | | |
| rsync -rt --chmod=Du=rwx,Dg=rx,Do=rx,Fu=rw,Fg=r,Fo=r --itemize-changes --stats --rsync-path="mkdir -p /var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }} && rsync" -e 'ssh -p 9922 -i sshkey -o StrictHostKeyChecking=no' build/distribution/ [email protected]:/var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }}/ | |
| - name: Upload to GitHub workflow artifacts store (macOS) | |
| if: (matrix.os == 'macos-14') && (steps.checksecrets.outputs.secretspresent == 'YES') && (startsWith(github.ref, 'refs/tags/') || inputs.notarization == true) | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| # tbn = to-be-notarized | |
| name: JabRef-macOS-arm-tbn | |
| path: build/distribution | |
| compression-level: 0 # no compression | |
| - name: Upload to GitHub workflow artifacts store | |
| if: (steps.checksecrets.outputs.secretspresent != 'YES') | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| # tbn = to-be-notarized | |
| name: JabRef-${{ matrix.os }} | |
| path: build/distribution | |
| compression-level: 0 # no compression | |
| notarize: # outsourced in a separate job to be able to rerun if this fails for timeouts | |
| name: macOS notarization-arm | |
| runs-on: macos-14 | |
| needs: [build] | |
| if: ${{ startsWith(github.ref, 'refs/tags/') || inputs.notarization == true }} | |
| steps: | |
| - name: Check secrets presence | |
| id: checksecrets | |
| shell: bash | |
| run: | | |
| if [ "$BUILDJABREFPRIVATEKEY" == "" ]; then | |
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | |
| echo "❌ Secret BUILDJABREFPRIVATEKEY not present" | |
| else | |
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | |
| echo "✔️ Secret BUILDJABREFPRIVATEKEY present" | |
| fi | |
| env: | |
| BUILDJABREFPRIVATEKEY: ${{ secrets.buildJabRefPrivateKey }} | |
| - name: Download from GitHub workflow artifacts store (macOS) | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: actions/download-artifact@master | |
| with: | |
| name: JabRef-macOS-arm-tbn | |
| path: build/distribution/ | |
| - name: Notarize dmg | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| xcrun notarytool store-credentials "notarytool-profile" --apple-id "[email protected]" --team-id "6792V39SK3" --password "${{ secrets.OSX_NOTARIZATION_APP_PWD }}" | |
| xcrun notarytool submit build/distribution/JabRef-${{ needs.build.outputs.major }}.${{ needs.build.outputs.minor }}-arm64.dmg --keychain-profile "notarytool-profile" --wait | |
| xcrun stapler staple build/distribution/JabRef-${{ needs.build.outputs.major }}.${{ needs.build.outputs.minor }}-arm64.dmg | |
| - name: Notarize pkg | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| xcrun notarytool store-credentials "notarytool-profile" --apple-id "[email protected]" --team-id "6792V39SK3" --password "${{ secrets.OSX_NOTARIZATION_APP_PWD }}" | |
| xcrun notarytool submit build/distribution/JabRef-${{ needs.build.outputs.major }}.${{ needs.build.outputs.minor }}-arm64.pkg --keychain-profile "notarytool-profile" --wait | |
| xcrun stapler staple build/distribution/JabRef-${{ needs.build.outputs.major }}.${{ needs.build.outputs.minor }}-arm64.pkg | |
| - name: Upload to builds.jabref.org | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| echo "${{ secrets.buildJabRefPrivateKey }}" > sshkey | |
| chmod 600 sshkey | |
| rsync -rt --chmod=Du=rwx,Dg=rx,Do=rx,Fu=rw,Fg=r,Fo=r --itemize-changes --stats --rsync-path="mkdir -p /var/www/builds.jabref.org/www/${{ needs.build.outputs.branchname }} && rsync" -e 'ssh -p 9922 -i sshkey -o StrictHostKeyChecking=no' build/distribution/ [email protected]:/var/www/builds.jabref.org/www/${{ needs.build.outputs.branchname }}/ |