Release 0.9.23 #220
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Release 0.9.23 #220
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yannikschaelte
commented
Nov 11, 2019
yannikschaelte
commented
- Fix extras_require directive.
- Fix error with histogram plot arguments.
- Extend test coverage for visualization (all Fix visualization issues #215).
- ABCSMC.{new,load,run} all return the history with set id for convenience.
- Document pickling paradigm of ABCSMC class (see doc/sampler.rst).
- Always use lazy evaluation in updates (all Various improvements #216).
- Restructure run function of ABCSMC class (Various improvements #216, disentangle transition, prior, weight #218).
- Run notebooks on travis only on pull requests (Feature travis faster #217).
- Correct weighting in AcceptanceRateScheme (Feature temperation scheme #219).
* fix wrong function called, now also eps viz tested * fix extras_require typo in setup.py * fix viz:histogram not passed arg; add tests * version 0.9.23, update releasenotes
* run nbs only on pull requests * fix do pr only on TRUE
* add note on pickling ABCSMC class
* always return history in {new,load,run}
* make max_nr_recorded_particles a parameter
* reformulate sample.get_first_m_sum_stats
* acceptor: always use lazy eval
* epsilon: always use lazy eval
* distance: always use lazy eval
* adapt tests
* smc: remove kwargs; postfix+initial of updates; move update steps to separate function _prepare_next_iteration
* update releasenotes
* add meta info to releasenotes
* document ABCSMC:history.id
* correct return types in {new,load}
* adapt resuming nb
* run nbs only on pull requests
* fix do pr only on TRUE
* document #217
* disentangle transition, prior, weight * fix codacy * deprecated warning for nr_samples_per_parameter * fix multiple */ errors * use t for model_probabilities * fix travis unexpected behavior * rerun notebooks * fix docs * add option to not apply RCIS * rerun pi nb to be sure
* tidy up smc run loop. NOTHING CHANGED YET * minor edit * streamline max_nr_recorded_particles; fixes #151 * add explanation of the old pickle size problem to sampler.rst * reorganize calculation of weights * add type hint * tmp * complete rewrite * adapt eps tests * fix resume test * multiple minor fixes * cover initial temperature in tests * add default minimum_epsilon; add test * fix typo * add cr noise nb * add noise nb to docs
Codecov Report
@@ Coverage Diff @@
## master #220 +/- ##
==========================================
+ Coverage 80.94% 82.69% +1.74%
==========================================
Files 84 84
Lines 4467 4554 +87
==========================================
+ Hits 3616 3766 +150
+ Misses 851 788 -63
Continue to review full report at Codecov.
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EmadAlamoudi
approved these changes
Nov 12, 2019
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