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links test has unreported failures #4672
Comments
These were found while investigating HDFGroupGH-4672, but they were not related to HDFGroupGH-4672.
At times, H5FDopen() is inside the H5E_PAUSE_ERRORS/H5E_RESUME_ERRORS or H5E_BEGIN_TRY/H5E_END_TRY block, but the private call H5FD_open is not. Sometime, "try" is passed in as false causing this difference between the API and internal function too. *FAILED* was printed. Please advice on how this issue can be resolved. |
@qkoziol Hi Quincey, in case you missed my comment above... Thanks! |
Ah, sorry, I missed this earlier. I'll take a look at it and see how to resolve the issue. |
[like] Binh-Minh Ribler reacted to your message:
…________________________________
From: Quincey Koziol ***@***.***>
Sent: Tuesday, August 20, 2024 11:59:03 PM
To: HDFGroup/hdf5 ***@***.***>
Cc: Binh-Minh Ribler ***@***.***>; Assign ***@***.***>
Subject: Re: [HDFGroup/hdf5] links test has unreported failures (Issue #4672)
@qkoziol<https://github.com/qkoziol> Hi Quincey, in case you missed my comment above... Thanks!
Ah, sorry, I missed this earlier. I'll take a look at it and see how to resolve the issue.
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These were found while investigating HDFGroupGH-4672, but they were not related to HDFGroupGH-4672.
* Warning fix (#4682) * warning fix * warning fix * CMake link line needs to use new HDF5_ENABLE_THREADS (#4685) * Correct the properties for using THREADS library (#4690) * Bump the github-actions group with 5 updates (#4688) Bumps the github-actions group with 5 updates: | Package | From | To | | --- | --- | --- | | [actions/download-artifact](https://github.com/actions/download-artifact) | `4.1.7` | `4.1.8` | | [DoozyX/clang-format-lint-action](https://github.com/doozyx/clang-format-lint-action) | `0.13` | `0.17` | | [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `2.0.6` | `2.0.8` | | [ossf/scorecard-action](https://github.com/ossf/scorecard-action) | `2.3.3` | `2.4.0` | | [github/codeql-action](https://github.com/github/codeql-action) | `3.25.11` | `3.25.15` | Updates `actions/download-artifact` from 4.1.7 to 4.1.8 - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](actions/download-artifact@65a9edc...fa0a91b) Updates `DoozyX/clang-format-lint-action` from 0.13 to 0.17 - [Release notes](https://github.com/doozyx/clang-format-lint-action/releases) - [Commits](DoozyX/clang-format-lint-action@v0.13...v0.17) Updates `softprops/action-gh-release` from 2.0.6 to 2.0.8 - [Release notes](https://github.com/softprops/action-gh-release/releases) - [Changelog](https://github.com/softprops/action-gh-release/blob/master/CHANGELOG.md) - [Commits](softprops/action-gh-release@a74c6b7...c062e08) Updates `ossf/scorecard-action` from 2.3.3 to 2.4.0 - [Release notes](https://github.com/ossf/scorecard-action/releases) - [Changelog](https://github.com/ossf/scorecard-action/blob/main/RELEASE.md) - [Commits](ossf/scorecard-action@dc50aa9...62b2cac) Updates `github/codeql-action` from 3.25.11 to 3.25.15 - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](github/codeql-action@b611370...afb54ba) --- updated-dependencies: - dependency-name: actions/download-artifact dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: DoozyX/clang-format-lint-action dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions - dependency-name: softprops/action-gh-release dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: ossf/scorecard-action dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions - dependency-name: github/codeql-action dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions ... * Fix segfault when closing datatype during failure in H5Topen2 (#4683) * Rework Dynamic Analysis and sanitize testing (#4681) * Ignore predetermined failing test and check pointer before use * Rework Analysis process * Remove another H5E_BEGIN/END_TRY within the library (#4675) * Update logic for (deprecated) H5Gget_objinfo() call to eliminate H5E_BEGIN_TRY * Handle case for '.' at the end of a path * Drop H5E_BEGIN/END_TRY and just check the error return from H5I_clear_types() (#4694) Original case that the change in commit 2dc738a no longer applies. * Add check of returned value from API calls. (#4702) These were found while investigating GH-4672, but they were not related to GH-4672. * Add mac dmg binary and remove old macos-13 workflows (#4699) * Add Windows SHLWAPI lib to public interface (#4701) * Use local variable in btree2 and print value (#4679) * Correct logic * Technically, level 1 Express could skip tests * Add windows signing (#4703) * Add tests for H5R get name APIs (#4657) Added functionality tests for the following APIs: H5Rget_file_name H5Rget_obj_name H5Rget_attr_name Also removed "+1" when returning a name length in H5R__get_attr_name(). The exter "+1" gave an incorrect value for the length of the referenced object's attribute name. Fixed GH-4447 * Fix Fortran test The C API H5Rget_attr_name incorrectly added 1 to the length of the referenced object's attribute name, so the Fortran API h5rget_attr_name_f removed 1 from the returned value to accommodate the incorrectness. This PR fixes H5Rget_attr_name so this workaround in h5rget_attr_name_f is no longer needed. * Add test H5Aget_name against H5Rget_attr_name * Replace Visual Studio ???? with 2022 in MSI README file (#4709) * Change logic for checking secrets exists (#4711) * Change osx refs to macos (#4707) * Replace alias \Code with \TText (#4714) Fixed GH-2151 * Correct signing names and variables (#4713) * Add secrets to release workflow (#4719) * Add missing blosc2 info (#4717) * Fix error return types in H5Rdeprec.c (#4722) Copy-pasted code from elsewhere used FAIL instead of H5G_UNKNOWN and H5I_INVALID_HID. * Fix the release reference name (#4721) * Test creating unseekable file (#4720) * Cleanup up tests (#4724) * Add arch name to dmg file name (#4732) The binaries in snapshot dmg file do not work on x86_64. * Fix snapshot CI failure by adding arch name to dmg file (#4734) See also #4732. * Fix incorrect VOL vs. non-VOL calls partially (#4733) * Fix incorrect VOL vs. non-VOL calls H5Lget_info2() called H5I_object() instead of H5VL_vol_object() crashed user application. This is a wide-spread issue (GH-4730) but this PR only addresses GH-4705. * Remove an incorrect change * Fix segfault in ROS3 credential parsing (#4736) * Fix segfault in s3 credential parsing * Fix AWS cred parsing when >1 profile provided * Revert gh-pages action hash to fix daily build (#4735) * Revert gh-pages action hash to fix daily build See also #4734 * Revert gh-pages action hash to fix daily build * Eliminate another use of H5E_clear_stack() within the library (#4726) * Remove call to H5E_clear_stack() Also clean up a bunch of error macros and the return value from H5B_valid()
PR to fix this is up: #4809 |
Switch public API calls to private ones. Root cause of #4672, which it fixes. Also minor code cleanups
Fixed in #4809 |
Switch public API calls to private ones. Root cause of HDFGroup#4672, which it fixes. Also minor code cleanups
* Remove dummy comments that repeat function names. (#4775) * Fix grammar in H5Odtype.c comment block (#4777) * Add subfiling checks to the gcc action (#4776) * Replace non-VOL calls with VOL calls - part 3 (#4771) This PR switches H5I_object() to H5VL_vol_object() in H5O and H5T APIs. H5M is the last one and left out of this PR because it needs more work in documentation and there is no test for the API functions. Fixes GH-4730 * Add subfiling to CI more places where we test parallel (#4778) * CMake: gcc,, AOCC * Autotools: AOCC (gcc was added in a previous commit) NVHPC generates a lot of tools errors for some reason * Convert Collective Calls html file to doxygen (#4779) * Fix grammar in H5Fint.c comment block (#4782) * Improve the consistency of configure help messages (#4783) Fix grammar in configure message * Fixes Fortran parallel build race condition for tests (#4789) * Update URL documentation links to support site (#4781) * Fix grammar and simplify comment in H5Fint.c (#4790) * Fix char-subscripts warnings in H5private.h (#4793) * Bump the github-actions group with 3 updates (#4798) Bumps the github-actions group with 3 updates: [actions/checkout](https://github.com/actions/checkout), [DoozyX/clang-format-lint-action](https://github.com/doozyx/clang-format-lint-action) and [github/codeql-action](https://github.com/github/codeql-action). Updates `actions/checkout` from 4.1.1 to 4.1.7 - [Release notes](https://github.com/actions/checkout/releases) - [Commits](actions/checkout@v4.1.1...v4.1.7) Updates `DoozyX/clang-format-lint-action` from 0.17 to 0.18 - [Release notes](https://github.com/doozyx/clang-format-lint-action/releases) - [Commits](DoozyX/clang-format-lint-action@v0.17...v0.18) Updates `github/codeql-action` from 3.25.15 to 3.26.6 - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](github/codeql-action@afb54ba...4dd1613) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: DoozyX/clang-format-lint-action dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions - dependency-name: github/codeql-action dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Fix typo argueably in H5Cprivate.h (#4795) * Fix typos in H5Cpkg.h (#4796) * Add bounds checking to avoid Out-of-bounds Write for gif2h5 (#4786) * Replace non-VOL calls with VOL calls - part 5 (#4788) This PR switches H5I_object() and H5I_object_verify() to H5VL_vol_object() and H5VL_vol_object_verify(), respectively, in the H5M APIs and H5Gdeprec (was left out by mistake). This completes the fixes of issue GH-4730. * Correct the URL paths (#4802) * Fix a few issues with error reporting during sec2 reads/writes (#4794) * Update windows and apple signing process (#4806) * Use latest clang format action (#4807) * Correct path to document (#4808) * Detect invalid ID to H5Gmove2 (#4765) User's application segfaulted because the returned value H5I_BADID wasn't detected when H5I_get_type() was called. This PR adds checks for invalid file/group identifiers passed into H5Gmove2. This defect occurs in many other places, hence, issue GH-4764. Fixes #4737 * Fix use of public API calls (#4809) Switch public API calls to private ones. Root cause of #4672, which it fixes. Also minor code cleanups * Remove call to H5E_clear_stack() (#4810) Remove call to H5E_clear_stack() in H5G_node_debug() Add misc. minor cleanups * Enable win Intel signing (#4812) * Remove unneeded file name part (#4814) * Update NVHPC optimization settings (#4815) * Use -gopt in Autotools/CMake instead of -g * Autotools uses -O3 for release, -O1 for debug * Remove CMake optimization flag removal hack * Add mirror VFD to serial -Werror CI action (#4753) * Add mirror VFD to serial -Werror CI action * NUL terminate mirror_vfd.c strings * Add THREADS check to configuration file (#4746) * Cleanup threads package checks * Check first if package was found * Remove unnecessary dependent checks * Remove Unused options and fix names of option prefix * Rework RFC url in aliases (#4813) * Update config/cmake/hdf5-config.cmake.in _ENABLE_THREADS doesn't belong in hdf5_1_14
Describe the bug
When running the 'links' test, it reports failures in the output, but doesn't cause the test to fail.
Expected behavior
Not fail
Platform (please complete the following information)
Current develop branch on MacOS
Additional context
Sample output:
The text was updated successfully, but these errors were encountered: