low-diff-minimal-enum-descriptions

[turbomam]

No description provided.

[turbomam]

try diff assets/mixs-schema-formatting-variants/original-regenerated.yaml assets/mixs-schema-formatting-variants/mixs_with_enum_descriptions.yaml

[turbomam]

also closes

• add minimal enum descriptions #837

[turbomam]

reducing verbose collection forms and removing inferrable metaslot values:

yq eval '(.. | select(has("from_schema")) | .from_schema) style="" | del(.. | select(has("from_schema")).from_schema)' original-regenerated.yaml  |\
    yq eval '.prefixes |= map_values(.prefix_reference)' |\
    yq eval '.settings |= map_values(.setting_value)'  |\
    yq eval 'del(.classes.[].name)' |\
    yq eval 'del(.classes.[].slot_usage.[].name)'  |\
    yq eval 'del(.enums.[].name)'  |\
    yq eval 'del(.enums.[].permissible_values.[].text)' |\
    yq eval 'del(.slots.[].domain)'  |\
    yq eval 'del(.slots.[].name)' |\
    yq eval 'del(.source_file)'  |\
    yq eval 'del(.subsets.[].name)' | cat > original-regenerated-reduced.yaml

[turbomam]

do some of these operations change the ordering within dicts or lists?

[turbomam]

which step adds { } to keys without values? any yq step?

[turbomam]

yamllint original-regenerated-reduced.yaml 

original-regenerated-reduced.yaml
  1:1       warning  missing document start "---"  (document-start)
  2:519     error    line too long (533 > 518 characters)  (line-length)
  3468:519  error    line too long (940 > 518 characters)  (line-length)
  3925:519  error    line too long (686 > 518 characters)  (line-length)
  4161:519  error    line too long (1423 > 518 characters)  (line-length)
  5280:519  error    line too long (1020 > 518 characters)  (line-length)
  5946:519  error    line too long (543 > 518 characters)  (line-length)
  5963:519  error    line too long (543 > 518 characters)  (line-length)
  6611:519  error    line too long (550 > 518 characters)  (line-length)
  6820:519  error    line too long (601 > 518 characters)  (line-length)
  6917:519  error    line too long (651 > 518 characters)  (line-length)
  6975:519  error    line too long (635 > 518 characters)  (line-length)
  7273:519  error    line too long (520 > 518 characters)  (line-length)
  7822:519  error    line too long (542 > 518 characters)  (line-length)
  7874:519  error    line too long (911 > 518 characters)  (line-length)
  10877:519 error    line too long (538 > 518 characters)  (line-length)
  10927:519 error    line too long (533 > 518 characters)  (line-length)
  12069:519 error    line too long (936 > 518 characters)  (line-length)
  12223:519 error    line too long (682 > 518 characters)  (line-length)
  16828:519 error    line too long (717 > 518 characters)  (line-length)

[turbomam]

poetry run python src/scripts/describe_enums_by_slots_using.py \
    --schema-file src/mixs/schema/mixs.yaml \
    --output-file assets/mixs-schema-formatting-variants/mixs_with_enum_descriptions.yaml
gen-linkml \
    --format yaml \
    --no-mergeimports \
    --no-materialize-attributes \
    --materialize-patterns assets/mixs-schema-formatting-variants/mixs_with_enum_descriptions.yaml |\
yq eval '(.. | select(has("from_schema")) | .from_schema) style="" | del(.. | select(has("from_schema")).from_schema)' |\
    yq eval '.prefixes |= map_values(.prefix_reference)' |\
    yq eval '.settings |= map_values(.setting_value)'  |\
    yq eval 'del(.classes.[].name)' |\
    yq eval 'del(.classes.[].slot_usage.[].name)'  |\
    yq eval 'del(.enums.[].name)'  |\
    yq eval 'del(.enums.[].permissible_values.[].text)' |\
    yq eval 'del(.slots.[].domain)'  |\
    yq eval 'del(.slots.[].name)' |\
    yq eval 'del(.source_file)'  |\
    yq eval 'del(.subsets.[].name)' |\
yamlfmt -in -conf .yamlfmt  > assets/mixs-schema-formatting-variants/mixs_with_enum_descriptions_standardized.yaml
rm -rf assets/mixs-schema-formatting-variants/mixs_with_enum_descriptions.yaml

[turbomam]

now redundant with

• YAML and LinkML auto-formatting and enumeration auto-describing #871