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cprnc build fix #3431
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cprnc build fix #3431
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jgfouca
approved these changes
Mar 2, 2020
ekluzek
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Mar 20, 2020
Tagging cime5.8.17 Originator: Bill Sacks Date: 3-15-2020 Tag: cime5.8.17 Answer Changes: None Tests: scripts_regression_tests, aux_clm Dependencies: none Brief Summary: - Separate mct and nuopc data, xcpl and stub components - Update pio2 - Documentation: provide a version dropdown menu and change theme - Add ne5pg2_ne5pg2_mg37 grid - Fix some issues User interface changes: None PR summary: git log --oneline --first-parent [previous_tag]..master 4f18807 Merge pull request ESMCI#3439 from billsacks/versioned_docs3 38c2b9f Merge pull request ESMCI#3441 from jedwards4b/thunder_port 5d9ff80 Merge pull request ESMCI#3451 from jedwards4b/check_inputdata_fix 3444503 Merge pull request ESMCI#3449 from ESMCI/jgfouca/improve_case_setup_clean 02a8eeb fix default for PIO_REARRANGER 49e82c6 Merge pull request ESMCI#3447 from jedwards4b/pio2_update ada1f09 Merge pull request ESMCI#3445 from ESMCI/fischer/ne5pg2 bbba1af Merge pull request ESMCI#3444 from alperaltuntas/datm_mesh_tol acc2d23 Merge commit 'e5265f03a6a8e1806e1b463b00c006b365e149d4' fadc3ee resolve conflicts 614b311 Merge pull request ESMCI#3440 from ESMCI/fischer/aq_scam 328e387 Merge pull request ESMCI#3392 from ESMCI/mvertens/new_component_directories3 a93ced5 need to explicitly state compiler used bf09ad8 minor change to get FFLAGS 20856d8 Merge pull request ESMCI#3431 from jedwards4b/complete_cprnc_fix 7fd3dae Merge pull request ESMCI#3430 from ESMCI/jgfouca/sharedlib_bld_serialization e75142f Merge pull request ESMCI#3424 from ESMCI/cprnc_build_machine Modified files: git diff --name-status [previous_tag] M config/cesm/config_files.xml M config/cesm/config_grids.xml M config/cesm/machines/config_batch.xml M config/cesm/machines/config_compilers.xml M config/cesm/machines/config_machines.xml M config/cesm/machines/config_pio.xml M config/e3sm/config_files.xml M config/ufs/config_files.xml M config/ufs/config_inputdata.xml M config/ufs/machines/config_batch.xml M config/ufs/machines/config_compilers.xml M config/ufs/machines/config_machines.xml M config/ufs/machines/config_workflow.xml M config/ufs/machines/template.chgres.run M config/ufs/machines/template.gfs_post.run M doc/README D doc/source/_static A doc/source/_static/pop_ver.js A doc/source/_templates/footer.html A doc/source/_templates/layout.html M doc/source/conf.py M scripts/lib/CIME/SystemTests/pre.py M scripts/lib/CIME/XML/env_batch.py M scripts/lib/CIME/build.py M scripts/lib/CIME/buildlib.py M scripts/lib/CIME/case/case_setup.py M scripts/lib/CIME/case/check_input_data.py M scripts/lib/CIME/case/preview_namelists.py M scripts/lib/CIME/hist_utils.py M scripts/lib/CIME/test_scheduler.py M scripts/tests/CMakeLists.txt M scripts/tests/scripts_regression_tests.py M src/build_scripts/buildlib.cprnc D src/components/data_comps/datm/doc/bookinfo.xml D src/components/data_comps/datm/doc/datacomps.xml D src/components/data_comps/datm/doc/intro.xml D src/components/data_comps/datm/doc/rundocbook.csh D src/components/data_comps/datm/doc/streams.xml D src/components/data_comps/datm/doc/ug.xml D src/components/data_comps/docn/tools/pop_som_frc/SOM.pdf D src/components/data_comps/dwav/bld/README R100 src/components/data_comps/datm/cime_config/buildlib src/components/data_comps_mct/datm/cime_config/buildlib R100 src/components/data_comps/datm/cime_config/buildnml src/components/data_comps_mct/datm/cime_config/buildnml R100 src/components/data_comps/datm/cime_config/config_archive.xml src/components/data_comps_mct/datm/cime_config/config_archive.xml R100 src/components/data_comps/datm/cime_config/config_component.xml src/components/data_comps_mct/datm/cime_config/config_component.xml R100 src/components/data_comps/datm/cime_config/namelist_definition_datm.xml src/components/data_comps_mct/datm/cime_config/namelist_definition_datm.xml R100 src/components/data_comps/datm/cime_config/user_nl_datm src/components/data_comps_mct/datm/cime_config/user_nl_datm R100 src/components/data_comps/datm/mct/atm_comp_mct.F90 src/components/data_comps_mct/datm/src/atm_comp_mct.F90 R100 src/components/data_comps/datm/mct/datm_comp_mod.F90 src/components/data_comps_mct/datm/src/datm_comp_mod.F90 R100 src/components/data_comps/datm/mct/datm_shr_mod.F90 src/components/data_comps_mct/datm/src/datm_shr_mod.F90 R100 src/components/data_comps/desp/cime_config/buildlib src/components/data_comps_mct/desp/cime_config/buildlib R099 src/components/data_comps/desp/cime_config/buildnml src/components/data_comps_mct/desp/cime_config/buildnml R100 src/components/data_comps/desp/cime_config/config_component.xml src/components/data_comps_mct/desp/cime_config/config_component.xml R100 src/components/data_comps/desp/cime_config/namelist_definition_desp.xml src/components/data_comps_mct/desp/cime_config/namelist_definition_desp.xml R100 src/components/data_comps/desp/cime_config/user_nl_desp src/components/data_comps_mct/desp/cime_config/user_nl_desp R100 src/components/data_comps/desp/desp_comp_mod.F90 src/components/data_comps_mct/desp/desp_comp_mod.F90 R100 src/components/data_comps/desp/esp_utils.F90 src/components/data_comps_mct/desp/esp_utils.F90 R100 src/components/data_comps/desp/mct/esp_comp_mct.F90 src/components/data_comps_mct/desp/src/esp_comp_mct.F90 R100 src/components/data_comps/dice/cime_config/buildlib src/components/data_comps_mct/dice/cime_config/buildlib R100 src/components/data_comps/dice/cime_config/buildnml src/components/data_comps_mct/dice/cime_config/buildnml R100 src/components/data_comps/dice/cime_config/config_archive.xml src/components/data_comps_mct/dice/cime_config/config_archive.xml R100 src/components/data_comps/dice/cime_config/config_component.xml src/components/data_comps_mct/dice/cime_config/config_component.xml R100 src/components/data_comps/dice/cime_config/namelist_definition_dice.xml src/components/data_comps_mct/dice/cime_config/namelist_definition_dice.xml R100 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src/components/data_comps_nuopc/dwav/cime_config/config_component.xml A src/components/data_comps_nuopc/dwav/cime_config/namelist_definition_dwav.xml A src/components/data_comps_nuopc/dwav/cime_config/user_nl_dwav R100 src/components/data_comps/dwav/nuopc/dwav_comp_mod.F90 src/components/data_comps_nuopc/dwav/src/dwav_comp_mod.F90 R100 src/components/data_comps/dwav/nuopc/wav_comp_nuopc.F90 src/components/data_comps_nuopc/dwav/src/wav_comp_nuopc.F90 R100 src/components/stub_comps/socn/cime_config/buildlib src/components/stub_comps_mct/satm/cime_config/buildlib R100 src/components/stub_comps/satm/cime_config/buildnml src/components/stub_comps_mct/satm/cime_config/buildnml R100 src/components/stub_comps/satm/cime_config/config_component.xml src/components/stub_comps_mct/satm/cime_config/config_component.xml R100 src/components/stub_comps/satm/mct/atm_comp_mct.F90 src/components/stub_comps_mct/satm/src/atm_comp_mct.F90 R100 src/components/stub_comps/srof/cime_config/buildlib 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src/components/stub_comps_mct/siac/cime_config/buildlib R100 src/components/stub_comps/siac/cime_config/buildnml src/components/stub_comps_mct/siac/cime_config/buildnml R100 src/components/stub_comps/siac/cime_config/config_component.xml src/components/stub_comps_mct/siac/cime_config/config_component.xml R100 src/components/stub_comps/siac/mct/iac_comp_mct.F90 src/components/stub_comps_mct/siac/src/iac_comp_mct.F90 R100 src/components/xcpl_comps/xglc/cime_config/buildlib src/components/stub_comps_mct/sice/cime_config/buildlib R100 src/components/stub_comps/sice/cime_config/buildnml src/components/stub_comps_mct/sice/cime_config/buildnml R100 src/components/stub_comps/sice/cime_config/config_component.xml src/components/stub_comps_mct/sice/cime_config/config_component.xml R100 src/components/stub_comps/sice/mct/ice_comp_mct.F90 src/components/stub_comps_mct/sice/src/ice_comp_mct.F90 R100 src/components/xcpl_comps/xice/cime_config/buildlib src/components/stub_comps_mct/slnd/cime_config/buildlib R100 src/components/stub_comps/slnd/cime_config/buildnml src/components/stub_comps_mct/slnd/cime_config/buildnml R100 src/components/stub_comps/slnd/cime_config/config_component.xml src/components/stub_comps_mct/slnd/cime_config/config_component.xml R100 src/components/stub_comps/slnd/mct/lnd_comp_mct.F90 src/components/stub_comps_mct/slnd/src/lnd_comp_mct.F90 R100 src/components/xcpl_comps/xlnd/cime_config/buildlib src/components/stub_comps_mct/socn/cime_config/buildlib R100 src/components/stub_comps/socn/cime_config/buildnml src/components/stub_comps_mct/socn/cime_config/buildnml R100 src/components/stub_comps/socn/cime_config/config_component.xml src/components/stub_comps_mct/socn/cime_config/config_component.xml R100 src/components/stub_comps/socn/mct/ocn_comp_mct.F90 src/components/stub_comps_mct/socn/src/ocn_comp_mct.F90 R100 src/components/xcpl_comps/xocn/cime_config/buildlib 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src/components/stub_comps_nuopc/satm/cime_config/buildlib A src/components/stub_comps_nuopc/satm/cime_config/buildnml A src/components/stub_comps_nuopc/satm/cime_config/config_component.xml A src/components/stub_comps_nuopc/sesp/cime_config/buildlib A src/components/stub_comps_nuopc/sesp/cime_config/buildnml A src/components/stub_comps_nuopc/sesp/cime_config/config_component.xml A src/components/stub_comps_nuopc/sglc/cime_config/buildlib A src/components/stub_comps_nuopc/sglc/cime_config/buildnml A src/components/stub_comps_nuopc/sglc/cime_config/config_component.xml A src/components/stub_comps_nuopc/siac/cime_config/buildlib A src/components/stub_comps_nuopc/siac/cime_config/buildnml A src/components/stub_comps_nuopc/siac/cime_config/config_component.xml A src/components/stub_comps_nuopc/sice/cime_config/buildlib A src/components/stub_comps_nuopc/sice/cime_config/buildnml A src/components/stub_comps_nuopc/sice/cime_config/config_component.xml A src/components/stub_comps_nuopc/slnd/cime_config/buildlib A src/components/stub_comps_nuopc/slnd/cime_config/buildnml A src/components/stub_comps_nuopc/slnd/cime_config/config_component.xml A src/components/stub_comps_nuopc/socn/cime_config/buildlib A src/components/stub_comps_nuopc/socn/cime_config/buildnml A src/components/stub_comps_nuopc/socn/cime_config/config_component.xml A src/components/stub_comps_nuopc/srof/cime_config/buildlib A src/components/stub_comps_nuopc/srof/cime_config/buildnml A src/components/stub_comps_nuopc/srof/cime_config/config_component.xml A src/components/stub_comps_nuopc/swav/cime_config/buildlib A src/components/stub_comps_nuopc/swav/cime_config/buildnml A src/components/stub_comps_nuopc/swav/cime_config/config_component.xml A src/components/xcpl_comps_mct/xatm/cime_config/buildlib R100 src/components/xcpl_comps/xatm/cime_config/buildnml src/components/xcpl_comps_mct/xatm/cime_config/buildnml R100 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src/components/xcpl_comps/xice/mct/ice_comp_mct.F90 src/components/xcpl_comps_mct/xice/src/ice_comp_mct.F90 A src/components/xcpl_comps_mct/xlnd/cime_config/buildlib R100 src/components/xcpl_comps/xlnd/cime_config/buildnml src/components/xcpl_comps_mct/xlnd/cime_config/buildnml R100 src/components/xcpl_comps/xlnd/cime_config/config_component.xml src/components/xcpl_comps_mct/xlnd/cime_config/config_component.xml R100 src/components/xcpl_comps/xlnd/mct/lnd_comp_mct.F90 src/components/xcpl_comps_mct/xlnd/src/lnd_comp_mct.F90 A src/components/xcpl_comps_mct/xocn/cime_config/buildlib R100 src/components/xcpl_comps/xocn/cime_config/buildnml src/components/xcpl_comps_mct/xocn/cime_config/buildnml R100 src/components/xcpl_comps/xocn/cime_config/config_component.xml src/components/xcpl_comps_mct/xocn/cime_config/config_component.xml R100 src/components/xcpl_comps/xocn/mct/ocn_comp_mct.F90 src/components/xcpl_comps_mct/xocn/src/ocn_comp_mct.F90 A src/components/xcpl_comps_mct/xrof/cime_config/buildlib R100 src/components/xcpl_comps/xrof/cime_config/buildnml src/components/xcpl_comps_mct/xrof/cime_config/buildnml R100 src/components/xcpl_comps/xrof/cime_config/config_component.xml src/components/xcpl_comps_mct/xrof/cime_config/config_component.xml R100 src/components/xcpl_comps/xrof/mct/rof_comp_mct.F90 src/components/xcpl_comps_mct/xrof/src/rof_comp_mct.F90 R100 src/components/xcpl_comps/xshare/mct/dead_data_mod.F90 src/components/xcpl_comps_mct/xshare/dead_data_mod.F90 R100 src/components/xcpl_comps/xshare/mct/dead_mct_mod.F90 src/components/xcpl_comps_mct/xshare/dead_mct_mod.F90 R100 src/components/xcpl_comps/xshare/mct/dead_mod.F90 src/components/xcpl_comps_mct/xshare/dead_mod.F90 A src/components/xcpl_comps_mct/xwav/cime_config/buildlib R100 src/components/xcpl_comps/xwav/cime_config/buildnml src/components/xcpl_comps_mct/xwav/cime_config/buildnml R100 src/components/xcpl_comps/xwav/cime_config/config_component.xml 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R100 src/components/xcpl_comps/xice/nuopc/ice_comp_nuopc.F90 src/components/xcpl_comps_nuopc/xice/src/ice_comp_nuopc.F90 A src/components/xcpl_comps_nuopc/xlnd/cime_config/buildlib A src/components/xcpl_comps_nuopc/xlnd/cime_config/buildnml A src/components/xcpl_comps_nuopc/xlnd/cime_config/config_component.xml R100 src/components/xcpl_comps/xlnd/nuopc/lnd_comp_nuopc.F90 src/components/xcpl_comps_nuopc/xlnd/src/lnd_comp_nuopc.F90 A src/components/xcpl_comps_nuopc/xocn/cime_config/buildlib A src/components/xcpl_comps_nuopc/xocn/cime_config/buildnml A src/components/xcpl_comps_nuopc/xocn/cime_config/config_component.xml R100 src/components/xcpl_comps/xocn/nuopc/ocn_comp_nuopc.F90 src/components/xcpl_comps_nuopc/xocn/src/ocn_comp_nuopc.F90 A src/components/xcpl_comps_nuopc/xrof/cime_config/buildlib A src/components/xcpl_comps_nuopc/xrof/cime_config/buildnml A src/components/xcpl_comps_nuopc/xrof/cime_config/config_component.xml R100 src/components/xcpl_comps/xrof/nuopc/rof_comp_nuopc.F90 src/components/xcpl_comps_nuopc/xrof/src/rof_comp_nuopc.F90 R100 src/components/xcpl_comps/xshare/nuopc/dead_methods_mod.F90 src/components/xcpl_comps_nuopc/xshare/dead_methods_mod.F90 R100 src/components/xcpl_comps/xshare/nuopc/dead_nuopc_mod.F90 src/components/xcpl_comps_nuopc/xshare/dead_nuopc_mod.F90 A src/components/xcpl_comps_nuopc/xwav/cime_config/buildlib A src/components/xcpl_comps_nuopc/xwav/cime_config/buildnml A src/components/xcpl_comps_nuopc/xwav/cime_config/config_component.xml R100 src/components/xcpl_comps/xwav/nuopc/wav_comp_nuopc.F90 src/components/xcpl_comps_nuopc/xwav/src/wav_comp_nuopc.F90 M src/drivers/mct/cime_config/config_component.xml M src/externals/pio2/CMakeLists.txt M src/externals/pio2/Makefile.am A src/externals/pio2/cmake/Makefile.am M src/externals/pio2/configure.ac M src/externals/pio2/doc/source/base.txt M src/externals/pio2/doc/source/netcdf_integration.txt M src/externals/pio2/examples/Makefile.am M src/externals/pio2/examples/c/CMakeLists.txt M src/externals/pio2/examples/c/Makefile.am M src/externals/pio2/examples/c/darray_async.c M src/externals/pio2/src/clib/CMakeLists.txt M src/externals/pio2/src/clib/Makefile.am M src/externals/pio2/src/clib/pio.h M src/externals/pio2/src/clib/pio_darray.c M src/externals/pio2/src/clib/pio_darray_int.c M src/externals/pio2/src/clib/pio_file.c M src/externals/pio2/src/clib/pio_internal.h M src/externals/pio2/src/clib/pio_lists.c M src/externals/pio2/src/clib/pio_msg.c M src/externals/pio2/src/clib/pio_nc.c M src/externals/pio2/src/clib/pio_rearrange.c M src/externals/pio2/src/clib/pioc.c M src/externals/pio2/src/clib/pioc_support.c M src/externals/pio2/src/flib/Makefile.am M src/externals/pio2/src/gptl/Makefile.am M src/externals/pio2/src/ncint/ncint_pio.c M src/externals/pio2/src/ncint/ncintdispatch.c M src/externals/pio2/tests/cunit/CMakeLists.txt M src/externals/pio2/tests/cunit/Makefile.am M src/externals/pio2/tests/cunit/run_tests.sh A src/externals/pio2/tests/cunit/test_async_1d.c M src/externals/pio2/tests/cunit/test_darray.c M src/externals/pio2/tests/cunit/test_spmd.c M src/externals/pio2/tests/fncint/Makefile.am M src/externals/pio2/tests/ncint/Makefile.am A src/externals/pio2/tests/ncint/pio_err_macros.h A src/externals/pio2/tests/ncint/run_perf.sh M src/externals/pio2/tests/ncint/run_tests.sh A src/externals/pio2/tests/ncint/tst_async_multi.c A src/externals/pio2/tests/ncint/tst_ncint_async_perf.c A src/externals/pio2/tests/ncint/tst_ncint_perf.c A src/externals/pio2/tests/ncint/tst_pio_async.c M src/externals/pio2/tests/ncint/tst_pio_udf.c M src/externals/pio2/tests/unit/Makefile.am M src/share/util/shr_infnan_mod.F90.in M tools/cprnc/CMakeLists.txt
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Complements the cprnc fix by only calling the build once in a suite
Test suite:
Test baseline:
Test namelist changes:
Test status: [bit for bit, roundoff, climate changing]
Fixes [CIME Github issue #]
User interface changes?:
Update gh-pages html (Y/N)?:
Code review: