v0.90.10

Oceananigans v0.90.10

Diff since v0.90.9

Merged pull requests:

• Support FunctionField as a Field.operand, similar to AbstractOperation (#3228) (@glwagner)
• Move distributed buildkite CI to the new-central queue (#3489) (@navidcy)
• (0.90.10) on_architecture method for all Oceananigans' types (#3490) (@simone-silvestri)
• Adds compute! method for collections (#3491) (@tomchor)
• Remove misleading comment (#3493) (@simone-silvestri)
• Use Julia v1.10.2 for CI (#3495) (@navidcy)
• Change default scheme for HydrostaticSphericalCoriolis (#3500) (@glwagner)

Closed issues:

• Creating a method to convert Function Fields to Fields (#3226)
• KernelFunctionOperation produces incorrect result when given a NamedTuple with an AbstractOperation (#3455)
• LatitudeLongitudeGrid may have incorrect metrics for y-Periodic domains (#3465)

😽 v0.90.9

Oceananigans v0.90.9

Diff since v0.90.8

Merged pull requests:

• Use Julia v1.10 for CI (#3403) (@navidcy)
• Scaling improvement for the distributed HydrostaticFreeSurfaceModel (#3404) (@simone-silvestri)
• (0.90.9) Fix a sign error in CATKE's implicit dissipative buoyancy flux (#3484) (@glwagner)

Closed issues:

• Are we actually @unrolling when we think we are? (#3374)
• maximum(abs, v) doesn't work on GPU in Julia 1.10.0 with grid size larger than (10, 10, 10) (#3427)

v0.90.8

Oceananigans v0.90.8

Diff since v0.90.7

Merged pull requests:

• (0.90.8) Rules for Time interpolation / extrapolation for FieldTimeSeries and InterpolatedField (#3450) (@glwagner)

Closed issues:

• FieldTimeSeries does not adapt correctly on GPU (#3472)

v0.90.7

Oceananigans v0.90.7

Diff since v0.90.6

Merged pull requests:

• Some type stabilization to get a new gradient from Enzyme (#3360) (@glwagner)
• Fixes error when reducing Fields with a condition on ImmersedBoundaryGrids (#3440) (@tomchor)
• Better docstring rendering (#3448) (@navidcy)
• Bump up SeawaterPolynomials to v0.3.4 (#3451) (@glwagner)
• Remove Enzyme from core dependency (#3452) (@navidcy)
• Update Docs/Model setup pages + fix bug with callsite=TendencyCallsite() in Callbacks (#3454) (@navidcy)
• Enhance Checkpointer + TendencyCallsite callback example (#3461) (@navidcy)
• More illustrative example for checkpointing (#3469) (@navidcy)
• (0.90.7) Remove argument splatting in hydrostatic free surface tendency kernel entry functions (#3477) (@glwagner)

Closed issues:

• Fusing kernels for calculating diagnostics to improve performance (#1483)
• The definition of gravity_unit_vector apparently doesn't match it's name (#2356)
• Building WENO advection with immersed grid fails due to grid size (#3137)
• Doc page for Callbacks outdated and does not appear under Docs/Model Setup (#3275)
• Ambiguous method error when calculating a conditional Average() with an ImmersedBoundaryGrid (#3439)
• 2D turbulence example missing fontsize keyword in Label call (#3442)
• WENOVectorInvariant method cleanup? (#3449)
• Callback with callsite=TendencyCallsite() doesn't work (#3456)
• Can we rewrite the pressure equation and calculate each term in it? (#3459)
• restore_from_checkpoint is deprecated? (#3462)
• Checkpointer required properties includes :architecture despite it can be inferred from grid (#3463)
• @fluidnumerics-joe the CI doesn't work... something's wrong with the Manifest you pushed. (#3470)

🎿 v0.90.6

Oceananigans v0.90.6

Diff since v0.90.5

Merged pull requests:

• Refactor Fields.interpolate to make sense for Nothing locations and Flat directions - take 2 (#3395) (@simone-silvestri)
• Enhance docstring for Integral (#3446) (@tomchor)
• (0.90.6) Bump (#3447) (@glwagner)

Closed issues:

• interpolate doesn't work with Nothing locations (#3356)

📟 v0.90.5

Oceananigans v0.90.5

Diff since v0.90.4

Merged pull requests:

• Change StokesDrift example in docs to a wavepacket moving with group velocity (#3425) (@navidcy)
• Improve references/citations in docs + enhances 3D Stokes drift example (#3430) (@navidcy)
• Add few papers in the "Papers and preprints using Oceananigans" (#3437) (@navidcy)
• Add missing adapt_structure for stokes drift (#3441) (@jagoosw)
• Use CairoMakie v0.11 for example/docs (#3443) (@navidcy)

Closed issues:

• Three-dimensional StokesDrift docstring example may be misleading (#3422)
• Non-standard function throws an error when used in a KernelFunctionOperation on the GPU (#3438)
• Question for 3D Stokes example (#3444)

⛲️ v0.90.4

Oceananigans v0.90.4

Added three-dimensional implementation of Stokes drift.

Diff since v0.90.3

Merged pull requests:

• Fixes bug with pre-defining diffusivity fields (#3367) (@jagoosw)
• (0.90.4) Implement three-dimensional StokesDrift 🌊 (#3384) (@glwagner)
• Fix docs for @apply_regionally (#3387) (@navidcy)
• Improve docstring example for seawater density (#3398) (@glwagner)
• Add convenience functions for conjuring TimeStepWizards and adding Callbacks (#3405) (@glwagner)
• Few fixes in few examples (#3414) (@navidcy)
• Adds some missing @inbounds (#3417) (@navidcy)
• Add @inbounds to ab2_step_Gu,v (#3421) (@navidcy)

Closed issues:

• compute_regionally must be deprecated (#3386)
• Split-explicit inbounds checks? (#3419)

👅 v0.90.3

Oceananigans v0.90.3

Diff since v0.90.2

Merged pull requests:

• (0.90.3) Fix bug in adapting ScalarDiffusivity and ScalarBiharmonicDiffusivity (#3413) (@glwagner)

🧑🏾‍🍳 v0.90.2

Oceananigans v0.90.2

Diff since v0.90.1

Merged pull requests:

• Default NaN-Checker for Particle Tracking models (#3376) (@simone-silvestri)
• Add OceanBioME.jl paper (#3380) (@navidcy)
• Updates Relaxation to work with grids with Flat dimensions (#3383) (@jagoosw)
• Tiny conversion of code to English (#3385) (@glwagner)
• Changes property "longname" to "long_name" for NetCDFOutputWriter (#3391) (@tomchor)
• Correction of three-dimensional Stokes drift implementation (#3392) (@BrodiePearson)
• Add link to arXiv for scalings in README (#3393) (@navidcy)
• Added adapt method for scalar and scalar biharmonic diffusvity + test (#3401) (@jagoosw)
• Fix CUDA compat entry (#3402) (@jagoosw)

Closed issues:

• Documentation for latest versions does not seem to be working (#3377)
• Prescribing realistic bottom bathymetry (#3389)
• Nonhydrostatic pressure correction broken? (#3397)

🕴️ v0.90.1

Oceananigans v0.90.1

Diff since v0.90.0

Merged pull requests:

• Non uniform partitioning for Distributed architectures (#3339) (@simone-silvestri)
• Fix advection timescale calculation (#3362) (@zhihua-zheng)
• Update regression test data (#3373) (@simone-silvestri)
• Removes pole warning from LatitudeLongitudeGrid (#3375) (@navidcy)
• (0.90.1) Bump to 0.90.1 to fix docs issue (#3378) (@glwagner)

Closed issues:

• Docs don't build for tagged releases (#3191)
• Regression test(s) for SplitExplicitFreeSurface (#3335)
• Should the time step wizard take into account of background velocity in calculation of CFL number? (#3357)