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@pmelsted pmelsted released this 27 Jan 17:25
· 255 commits to master since this release
v0.40.0
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Fixes to count, closes issue #40 when generating TCC matrices

Adds cite and version commands. Modifies merge command and project command.

If the BUS file is written to contain the read number in the flag column, using kallisto bus -n then the reads can be processed against multiple indices, derived from portions of the full transcriptome, and the resultant BUSfiles can be merged into a single BUS file with bustools merge. This is useful when index memory requirements are low as with RNA velocity.

bustools project takes in a map which is a two column file mapping barcodes to barcodes, umis to umis, or transcripts to genes thereby changing the coordinate system of the BUS file.

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