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TCC mtx file is not valid #40
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Can you send me a the path to where the data is, both the fastq and bus files |
I am facing this issue with my data too (v0.39.4).. what was the solution? |
Pall said this problem is fixed in the development version. |
Thanks @lambdamoses . I'll try re-compiling from the devel branch |
devel branch seems to indeed fix the issue 👍 |
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It seems that the mtx file for TCC matrices generated by
bustools
is not valid. When I tried to read the file into R withMatrix::readMM
, I got this error:The column index must be wrong for some entries. For instance, for one of the files I inspected, the maximum column index is actually 738421, while the
mtx
file indicates 499458. Meanwhile, for that dataset, thematrix.ec
file has 489048 lines.The text was updated successfully, but these errors were encountered: