Skip to content

Releases: yhoogstrate/bam-lorenz-coverage

v2.3.0

13 Sep 20:11
a3bca71
Compare
Choose a tag to compare
  • v2.3.0 - Adds arguments -r/--region and -b/--bed-regions to target specific genomic regions. This way alternative loci can be excluded for instance.

v2.2.0

13 Sep 15:32
d53422f
Compare
Choose a tag to compare
  • v2.2.0 - Removes --roc argument and adds multiple statistics including ROC to the -s/--stats argument.

v2.1.0

11 Sep 11:46
d663b81
Compare
Choose a tag to compare
  • v2.1.0 - Adds unit tests and can calculate ROC for Lorenz curves

v2.0.0

05 Sep 10:00
ca1fdd0
Compare
Choose a tag to compare
  • Runs samtools.depth as parallel backgroud pysam process that writes its output to a named pipe (fifo), and in the foreground parses the fifo chunkwise.