Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

数据集优有一点小问题 #2

Open
hsdjkfnsfc opened this issue Oct 15, 2021 · 6 comments
Open

数据集优有一点小问题 #2

hsdjkfnsfc opened this issue Oct 15, 2021 · 6 comments

Comments

@hsdjkfnsfc
Copy link

作者您的数据集当中,在pickle文件以及text文件当中使用多个是您本机的绝对路径,希望您更改一下。

同时我在运行您的test文件的时候发现Cell Spatial Location的结果与您的论文一致,但是Cell Logical Location完全不一致
image
image

@xuewenyuan
Copy link
Owner

@hsdjkfnsfc 谢谢反馈,请问您是从哪个链接下载的数据集和模型,我看一下

@hsdjkfnsfc
Copy link
Author

hsdjkfnsfc commented Oct 18, 2021 via email

@EmperorKaiser
Copy link

可以写个脚本自行修改一下根目录,我排查了一下,是每个目录下的train.txt,val.txt, test.txt, 还有gt文件夹下的每个pkl里面的image_path字段,这些地方的路径都可以替换为相对路径,或者自己的绝对路径

@xuewenyuan
Copy link
Owner

@EmperorKaiser 谢谢。
@hsdjkfnsfc 抱歉回复比较晚。我在cuda10.2下复现了你的问题,但是切换到cuda9.2后,结果正常。所以,很可能是不同cuda版本下,软件的影响,特别时torch geometric。
我的测试环境:

  • cuda 9.2
  • torch 1.7.0+torchvision 0.8.0
  • torch-cluster 1.5.9
  • torch-geometric 1.6.3
  • torch-scatter 2.0.6
  • torch-sparse 0.6.9
  • torch-spline-conv 1.2.1

@lmmlzn
Copy link

lmmlzn commented Nov 10, 2022

@hsdjkfnsfc @xuewenyuan @EmperorKaiser 数据集是不是少了一个graph_edge的文件夹,只有gt、graph_node和graph_target文件夹

@YongZ-Lee
Copy link

您好,数据集graph_target缺少这个怎么解决呢? @xuewenyuan

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

5 participants