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@dozy dozy released this 20 Jun 12:04
· 1298 commits to master since this release
  • RNA-SeQC
    - added template for rna_seqc check with selected metrics shown in summary
    - include a link to original RNA-SeQC report in check's template
    - npg_qc::autoqc::qc_store - load rna_seqc results into new rna_seqc table in npg_qc database.
  • SeqQC: Build will fail if no node, npm or bower are available in path
  • do not install NPGQC web app
  • use one version of samtools
  • update script for deleting autoqc database results so that it can handle composition-based tables
  • remove attribute qc_report_dir from check object: the output directory is created by default using the sample's filename root
  • increase HTTP timeout when reporting manual qc outcomes to LIMs