Updates to reaktoro defaults and inclusion of exclusion options #87
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| name: Checks | |
| on: | |
| push: | |
| branches: [main] | |
| tags: ['*'] | |
| pull_request: | |
| branches: [main] | |
| env: | |
| PYTEST_ADDOPTS: --color=yes | |
| PIP_PROGRESS_BAR: "off" | |
| KERNEL_NAME: reaktoro-pse-dev | |
| defaults: | |
| run: | |
| # -l: login shell, needed when using Conda: | |
| shell: bash -l {0} | |
| jobs: | |
| code-formatting: | |
| name: Check code is formatted (Black) | |
| # OS and/or Python version don't make a difference, so we choose ubuntu and 3.12 as defaults | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Install Black | |
| # unlike the other jobs, we don't need to install all the dev dependencies, | |
| # but we still want to specify the Black version to use in requirements-dev.txt for local development | |
| # so we extract the relevant line and pass it to a simple `pip install` | |
| run: | | |
| black_requirement="$(grep '^black==' requirements-dev.txt)" | |
| pip install "$black_requirement" | |
| - name: Run Black to verify that the committed code is formatted | |
| run: | | |
| black --check . | |
| pytest: | |
| name: pytest (${{ matrix.os }}/${{ matrix.python-version }}/${{ matrix.install-mode }}) | |
| runs-on: ${{ matrix.os-version }} | |
| needs: [code-formatting] | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| install-mode: | |
| - dev | |
| # - standard | |
| python-version: | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| - "3.12" | |
| os: | |
| - linux | |
| - win64 | |
| # - macos | |
| include: | |
| - os: linux | |
| os-version: ubuntu-22.04 | |
| - os: win64 | |
| os-version: windows-2022 | |
| # - os: macos | |
| # os-version: macos-14 | |
| - install-mode: dev | |
| python-version: "3.11" # choice of Python version is arbitrary among those in matrix | |
| coverage: "true" | |
| steps: | |
| - if: matrix.install-mode == 'dev' | |
| uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| miniforge-version: latest | |
| channels: conda-forge | |
| activate-environment: ${{ matrix.install-mode == 'dev' && 'reaktoro-pse-dev' || 'reaktoro-pse' }} | |
| - name: Install conda-forge dependencies | |
| run: | | |
| conda install reaktoro=2.12 cyipopt=1.4.1 | |
| - if: matrix.install-mode == 'dev' | |
| name: Install (dev) | |
| run: | | |
| pip install -r requirements-dev.txt | |
| pip list | |
| - if: matrix.install-mode == 'standard' | |
| name: Install (standard) | |
| run: | | |
| pip install "git+${{ format('{0}/{1}@{2}', github.server_url, github.repository, github.ref) }}" | |
| - name: Install (idaes-solvers) | |
| run: | | |
| idaes get-extensions | |
| - if: matrix.coverage | |
| name: Enable coverage for pytest | |
| run: echo PYTEST_ADDOPTS="$PYTEST_ADDOPTS --cov --cov-report=xml" >> $GITHUB_ENV | |
| - name: Run pytest | |
| run: | | |
| pip install pytest # ensure pytest is installed (should do nothing if already present from requirements-dev.txt) | |
| pytest --pyargs reaktoro_pse --verbose | |
| - name: Install Jupyter kernel | |
| run: | | |
| jupyter kernelspec list | |
| python -m ipykernel install --user --name "${{ env.KERNEL_NAME }}" | |
| jupyter kernelspec list | |
| - name: Run pytest with nbmake | |
| run: | | |
| pytest --nbmake --nbmake-kernel="${{ env.KERNEL_NAME }}" src/reaktoro_pse/tutorials/*.ipynb | |
| - name: Upload coverage report as job artifact | |
| if: matrix.coverage | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage-report-${{ matrix.os }} | |
| path: coverage.xml | |
| if-no-files-found: error |