Overview

3Dmapper is a command line tool based on R and Python programming languages that maps annotated genomic variants or positions to protein structures.

Dependencies

• BLAST standalone software version >= 2.6. Follow these instructions to download and use the command line tool.
• Python > 3.6
• R version > 3.5
• GNU parallel

Quick install

Execute the following code in Terminal:

git clone https://github.com/vicruiser/3Dmapper.git
cd 3Dmapper
pip install . 
sh r_dependencies.sh

Tutorial

To learn how to use 3Dmapper, please refer to our Wiki.