deconstruct usability improvements #3294
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Changelog Entry
To be copied to the draft changelog by merger:
vg deconstructcan more easily use reference paths (or subpaths) from the GBWTDescription
Add subpath support to
deconstructnames. So if it finds a reference path that looks like chr21[10-5000], the VCF will be written in terms of chr21 with the offset taken into account. This goes for path selection too. Also, reference paths can be selected from the GBWT without needing thread prepended.