Merge pull request #2780 from vgteam/minor-bugfix-mpmap

Fix a minor bug in mpmap
vgteam · May 10, 2020 · 76a19e6 · 76a19e6 · adamnovak · May 10, 2020
2 parents b5cca2d + 1ec80f1
commit 76a19e6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/multipath_alignment.cpp b/src/multipath_alignment.cpp
@@ -1678,7 +1678,7 @@ namespace vg {
                     // do we need to merge the abutting edits?
                     int64_t edit_idx = 0;
                     if (final_mapping->edit_size() && first_mapping.edit_size()) {
-                        Edit* final_edit = final_mapping->mutable_edit(0);
+                        Edit* final_edit = final_mapping->mutable_edit(final_mapping->edit_size() - 1);
                         const Edit& first_edit = first_mapping.edit(0);
                         if ((first_edit.from_length() > 0) == (final_edit->from_length() > 0) &&
                             (first_edit.to_length() > 0) == (final_edit->to_length() > 0) &&