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adjust default mpmap params in CI test
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jeizenga committed May 27, 2022
1 parent aa143dd commit 58a65e7
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2 changes: 1 addition & 1 deletion vgci/vgci.py
Original file line number Diff line number Diff line change
Expand Up @@ -1328,7 +1328,7 @@ def test_sim_mhc_snp1kg_mpmap(self):
acc_threshold=0.02, auc_threshold=0.02,
sim_opts='-d 0.01 -p 1000 -v 75.0 -S 5 -I',
sim_fastq=self._input('platinum_NA12878_MHC.fq.gz'),
more_mpmap_opts=['-u 8'])
more_mpmap_opts=['-u 8 -M 1'])

@timeout_decorator.timeout(4000)
def test_sim_yeast_cactus(self):
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@adamnovak
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vg CI tests complete for branch gampcompare-gmq. View the full report here.

16 tests passed, 0 tests failed and 0 tests skipped in 11815 seconds

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