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Dockerfile -> RHEL 8 + intrahost tn93 script #44

Merged
merged 10 commits into from
Jun 10, 2024
Merged

Dockerfile -> RHEL 8 + intrahost tn93 script #44

merged 10 commits into from
Jun 10, 2024

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niemasd
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@niemasd niemasd commented May 29, 2024

The main contribution of this PR is the migration of the Dockerfile from Oracle Linux to RHEL 8 (technically Red Hat UBI 8, which is their public Docker base image that is equivalent to their enterprise RHEL 8 image)

This PR also contains a small script I had written during the HIV-TRACE retreat to calculate intrahost pairwise distances using tn93 (e.g. for QC of individuals with multiple collected sequences)

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niemasd commented Jun 1, 2024

@stevenweaver @spond Can you review this PR? I think it should be good to go

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niemasd commented Jun 10, 2024

@stevenweaver @spond Just wanted to ping: can you review this PR? I think it should be good to go

@stevenweaver stevenweaver merged commit 2dbfd5b into veg:master Jun 10, 2024
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2 participants