Revert OpenMP edits (will try to incorporate Sergei's fix)

veg · Nov 17, 2023 · 3d8be03 · 3d8be03
1 parent 45c86d2
commit 3d8be03
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/src/ShortestPathTN93.cpp b/src/ShortestPathTN93.cpp
@@ -89,7 +89,7 @@ void relaxDistanceEstimates (const unsigned long theSequence, const long firstSe
 
 
     #if _OPENMP >= 200805
-      #pragma omp parallel for default(none) shared(my_distance_estimate,nodeParents,workingNodes,distanceEstimates)
+      #pragma omp parallel for default(none) shared(my_distance_estimate,nodeParents,workingNodes,distanceEstimates, step_penalty, min_overlap, resolutionOption, firstSequenceLength, theSequence, left_to_do)
     #else
       #pragma omp parallel for default(none) shared(my_distance_estimate,nodeParents,workingNodes,distanceEstimates)
     #endif

diff --git a/src/read_reducer.cpp b/src/read_reducer.cpp
@@ -125,7 +125,7 @@ void handle_a_sequence (StringBuffer& current_sequence, StringBuffer& current_cl
 
         #ifdef _OPENMP
           #if _OPENMP >= 200805
-            #pragma omp parallel for default(none) shared(currently_defined_clusters, try_cluster, sequence_lengths, current_sequence, current_clusters)
+            #pragma omp parallel for default(none) shared(currently_defined_clusters, try_cluster, sequence_lengths, current_sequence, current_clusters, firstSequenceLength, min_overlap)
           #else 
             #pragma omp parallel for default(none) shared(currently_defined_clusters, try_cluster)
           #endif